#WARNING:no index is registered index "YP_009725309.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725309.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | |
1 | a | A(queryA) | D 1 (D) | polymer(polypeptide(L)) [514 aa] | Polyprotein 1ab :Q1T6X8_CVHSA |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:5nfy_D_1 identity=92.8% |
queryA 1:AENVTGLFKDCSKVITGLHPTQAPTHLSVDTKFKTEGLCVDIPGIPKDMTYRRLISMMGFKMNYQVNGYPNMFITREEAIRHVRAWIGFDVEGCHATREA: 100 :************* **************** ******************************************************************* *: 5nfy_D_1 8:AENVTGLFKDCSKIITGLHPTQAPTHLSVDIKFKTEGLCVDIPGIPKDMTYRRLISMMGFKMNYQVNGYPNMFITREEAIRHVRAWIGFDVEGCHATRDA: 107 SecStr : STT B B S B TTT SSGGGB GGGEETTEE TTS S EEE TT SB HHHHHHTGGGEEEEEEEEEEE SSB: ExpBur :eeeeeeeeeebbeeeeebbeebbeeeebbbeebeeeeeeeeeeeeeeeeebebbbbbeebeeeeeeeeebebebeeeebeeebbbbbbbbbbbbebeeeb: queryA 101:VGTNLPLQLGFSTGVNLVAVPTGYVDTPNNTDFSRVSAKPPPGDQFKHLIPLMYKGLPWNVVRIKIVQMLSDTLKNLSDRVVFVLWAHGFELTSMKYFVK: 200 :*************************** *** * ** ************************************** ************************: 5nfy_D_1 108:VGTNLPLQLGFSTGVNLVAVPTGYVDTENNTEFTRVNAKPPPGDQFKHLIPLMYKGLPWNVVRIKIVQMLSDTLKGLSDRVVFVLWAHGFELTSMKYFVK: 207 SecStr : S EEEEEEEESSS EEE EEEEE SSSEEEEE EE SSGGGGGGTTHHHH HHHHHHHHHHHHHHHHTTT SS EEEESSTHHHHHHHTTTB : ExpBur :eebebbbbbbbeeeeebbbbbbbbbbbeeeeeeeebeeeebeeeeeeebeebeeebeebeebbeebbebbbeebeebeebbbbbbbeeebbbbbbebbbe: queryA 201:IGPERTCCLCDRRATCFSTASDTYACWHHSIGFDYVYNPFMIDVQQWGFTGNLQSNHDLYCQVHGNAHVASCDAIMTRCLAVHECFVKRVDWTIEYPIIG: 300 :*********** ******* ******* ** *************************** ******************************** ******: 5nfy_D_1 208:IGPERTCCLCDKRATCFSTSSDTYACWNHSVGFDYVYNPFMIDVQQWGFTGNLQSNHDQHCQVHGNAHVASCDAIMTRCLAVHECFVKRVDWSVEYPIIG: 307 SecStr : S B TTSSSB EEETTTTEEE TTT S EE S EEEEGGGGT SS HHHHHHTT SSS S HHHHHHHHHHHHHHHHHTSS TT S: ExpBur :ebeeeebeeeeebbbbbbeeeeebbbbeebeebbbbbbbbbbbbeebeeeeebeebbeeebeeeeeeeebbbbbebbbbbbbbbbbeeeeeeebebeeee: queryA 301:DELKINAACRKVQHMVVKAALLADKFPVLHDIGNPKAIKCVPQADVEWKFYDAQPCSDKAYKIEELFYSYATHSDKFTDGVCLFWNCNVDRYPANSIVCR: 400 :*** * *********** ************************* ************************** * ********************* ****: 5nfy_D_1 308:DELRVNSACRKVQHMVVKSALLADKFPVLHDIGNPKAIKCVPQAEVEWKFYDAQPCSDKAYKIEELFYSYAIHHDKFTDGVCLFWNCNVDRYPANAIVCR: 407 SecStr :S HHHHHHHHHHHHHHHHHHHHHH SEEEEES SS SSTT SSEEEEEESS STT TTEEE HHHHTTTT SSEEEEES S SSEEEEE: ExpBur :ebeebeebbeebeebbbebbbebeebebbbbbebeebeebbeeeebebebbbeeeeeeeeeebeebebbeeebeeebeebbbbbbebebeebbebbbbbb: queryA 401:FDTRVLSNLNLPGCDGGSLYVNKHAFHTPAFDKSAFVNLKQLPFFYYSDSPCESHGKQVVSDIDYVPLKSATCITRCNLGGAVCRHHANEYRLYLDAYNM: 500 :************************************ **************** **************************** *******: 5nfy_D_1 408:FDTRVLSNLNLPGCDGGSLYVNKHAFHTPAFDKSAFTNLKQLPFFYYSDSPCEXXXXXXXXXXXYVPLKSATCITRCNLGGAVCRHHANEYRQYLDAYNM: 507 SecStr :E TT SSEEE SSS EEE SSS EEE GGGGTTEEE EEE S ----------- TTEEESS SSS HHHHHHHHHHHHHHHH: ExpBur :bbbeeeeebbbebbeebbbbbbebbebbeebeeebbeebeebebbbbbeeeee-----------eeeeeeeebbbeeeeeeeebeebbeebeebeebbeb: queryA 501:MISAGFSLWVYKQFDTYNLWNTFTR: 525 :********* ***************: 5nfy_D_1 508:MISAGFSLWIYKQFDTYNLWNTFTR: 532 SecStr :HHHTTEEEEEETT THHHHTTS : ExpBur :beebbbbbbbbeebeeeebeeebee: |