#WARNING:no index is registered index "YP_009725309.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725309.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | C 1 (C) | polymer(polypeptide(L)) [514 aa] | Polyprotein 1ab :Q1T6X8_CVHSA | |
2 | b | T 1 (C) | non-polymer(PEG) | DI(HYDROXYETHYL)ETHER | 209L (identity: 100.0 %/92.8 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:5nfy_C_1 identity=92.8% |
queryA 1:AENVTGLFKDCSKVITGLHPTQAPTHLSVDTKFKTEGLCVDIPGIPKDMTYRRLISMMGFKMNYQVNGYPNMFITREEAIRHVRAWIGFDVEGCHATREA: 100 :************* **************** ******************************************************************* *: 5nfy_C_1 8:AENVTGLFKDCSKIITGLHPTQAPTHLSVDIKFKTEGLCVDIPGIPKDMTYRRLISMMGFKMNYQVNGYPNMFITREEAIRHVRAWIGFDVEGCHATRDA: 107 SecStr : TT B B S TTT SSSTTS GGGEETTEE TTS S EEEE TT SB HHHHHHTGGGEEEEEEEEEEE SSB: ExpBur :eeeeeeeeeebbeeeebbbeebbeeeeebbeebeeeeeeeeeeeeeeeeebebbbbbeeeeeeeeeeeeeebebeeeebeebbbbbbbbbbbbbebbeeb: queryA 101:VGTNLPLQLGFSTGVNLVAVPTGYVDTPNNTDFSRVSAKPPPGDQFKHLIPLMYKGLPWNVVRIKIVQMLSDTLKNLSDRVVFVLWAHGFELTSMKYFVK: 200 :*************************** *** * ** ************************************** ************************: 5nfy_C_1 108:VGTNLPLQLGFSTGVNLVAVPTGYVDTENNTEFTRVNAKPPPGDQFKHLIPLMYKGLPWNVVRIKIVQMLSDTLKGLSDRVVFVLWAHGFELTSMKYFVK: 207 SecStr : S EEEEEEEESSS EEE EEEEEESSSEEEEE EE SSSTTGGGSGGGTS HHHHHHHHHHHHHHHHTTT SS EEEESSHHHHHHHHTTTB : ExpBur :eebebbbbbbbebeeebbbbbbbbbbbeeeeeeeebebebbeeeeeeebeebbeeeeebeebbeebbebbbeebeebbebbbbbbbeeebbbbbbebbbe: queryA 201:IGPERTCCLCDRRATCFSTASDTYACWHHSIGFDYVYNPFMIDVQQWGFTGNLQSNHDLYCQVHGNAHVASCDAIMTRCLAVHECFVKRVDWTIEYPIIG: 300 :*********** ******* ******* ** *************************** ******************************** ******: 5nfy_C_1 208:IGPERTCCLCDKRATCFSTSSDTYACWNHSVGFDYVYNPFMIDVQQWGFTGNLQSNHDQHCQVHGNAHVASCDAIMTRCLAVHECFVKRVDWSVEYPIIG: 307 SecStr : S B SSSSSB EEETTTTEEE TTT TT EE S EEEESGGGT SS HHHHHHTT SSS SSHHHHHHHHHHHHHHTTTTS TT S: ExpBur :ebeeeebeebeebbbbbbeeeeebbbbeebeebbbbbbbbbbbbeeeeeeeebeebbeeebeeeeeeeebbbebebbbbbbbbbbbeeebeeebebeeee: Contact : b queryA 301:DELKINAACRKVQHMVVKAALLADKFPVLHDIGNPKAIKCVPQADVEWKFYDAQPCSDKAYKIEELFYSYATHSDKFTDGVCLFWNCNVDRYPANSIVCR: 400 :*** * *********** ************************* ************************** * ********************* ****: 5nfy_C_1 308:DELRVNSACRKVQHMVVKSALLADKFPVLHDIGNPKAIKCVPQAEVEWKFYDAQPCSDKAYKIEELFYSYAIHHDKFTDGVCLFWNCNVDRYPANAIVCR: 407 SecStr :SHHHHHHHHHHHHHHHHHHHHHHT SEEEEES SS SSSS SSEEEEEESS STTGGGEEE HHHHTTT SSEEEEES SS SSEEEEE: ExpBur :ebeebeebbeebbebbbebbbebeebebbbbbebbebeebbeeeebebebbbeeeeeeeeeebeebebeeeebeeebeebbbbbbebebeebbebbbbbb: queryA 401:FDTRVLSNLNLPGCDGGSLYVNKHAFHTPAFDKSAFVNLKQLPFFYYSDSPCESHGKQVVSDIDYVPLKSATCITRCNLGGAVCRHHANEYRLYLDAYNM: 500 :************************************ **************** **************************** *******: 5nfy_C_1 408:FDTRVLSNLNLPGCDGGSLYVNKHAFHTPAFDKSAFTNLKQLPFFYYSDSPCEXXXXXXXXXXXYVPLKSATCITRCNLGGAVCRHHANEYRQYLDAYNM: 507 SecStr :E TT STTEEE SSS EEEESSSEEEE GGGGTTEEE EEE ----------- TTEEETT SSS SHHHHHHHHHHHHHHH: ExpBur :bbbeeeeebbbebbeebbbbbbebbebbeeeeeebbeebeebeebbbbeeeee-----------eeeeeeeebbbeeeeeebebeebeeebeebeebbee: queryA 501:MISAGFSLWVYKQFDTYNLWNTFTR: 525 :********* ***************: 5nfy_C_1 508:MISAGFSLWIYKQFDTYNLWNTFTR: 532 SecStr :HHHTTEEEEEETT SHHHHTTS : ExpBur :beeebbbbbbbeebeeeebeebbee: |