#WARNING:no index is registered index "YP_009725307.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725307.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | A 1 (A) | polymer(polypeptide(L)) [814 aa] | RNA-directed RNA polymerase nsp12 :R1AB_SARS2 | |
2 | b | B 1 (B) | polymer(polypeptide(L)) [115 aa] | Non-structural protein 8 :R1AB_SARS2 | 270L 271L 272K 273Y 324T 325S 326F 328P 329L 330V 331R 332K 338V 339P 340F 341V 344T 368F 371L 378P 379A 380M 381H 382A 384S 386N 387L 388L 389L 390D 391K 392R 396F 398V 402T 403N 405V 407F 447N 509W 514L 515Y 518S 666M (identity: 100.0 %/97.8 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7b3c_A_1 identity=97.8% |
queryA 31:VYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQ-------------: 117 :******************** : 7b3c_A_1 34:VYRAFDIYNDKVAGFAKFLK-------------------------------------------------------------------XXXXXXXXXXXXX: 66 SecStr : EEEEEEESSS EEEEEEE --------------------------------------------------------------------------------: ExpBur :eeebbbeeeeebbbbbebee--------------------------------------------------------------------------------: queryA 118:------------------------------------------------------RLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWY: 163 : **********************************************: 7b3c_A_1 67:XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWY: 166 SecStr :------------------------------------------------------ SSBHHHHHHHHHS SS HHHHHHHHHTTSS THHHHSTT S: ExpBur :------------------------------------------------------eebebbbbbbbbbbbbbeeeebebbeebbeebebbeeebbeeeebb: queryA 164:DFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTK: 263 :****************************************************************************************************: 7b3c_A_1 167:DFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTK: 266 SecStr : TTT TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTEE B GGGBBTTS B TT EE STT B HHHHHHHHHHHHHTTGGGGGGBGGG SSS: ExpBur :bbbebeebbebbeebbeebbebbeebbebbeebeeebeebbbbbbbbbbebebeeeeeeeeeeeeebebebbbbbbbbbbbbbbbebbebbbbeebeeee: queryA 264:PYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHS: 363 :************************************************************************************************** : 7b3c_A_1 267:PYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLXX: 366 SecStr : B TT HHHHHHHHHHHSTT S SSGGG SSHHHHHHHHHHHHHHHTTS GGGSEEEEEEEEETTEEEEEEEEEEETTTEEEE SS --: ExpBur :eeeeeeeeeeebbeebeebbeebbebbeeebbbbbeebeebebbbbbbbbbbbbbebbeeebbbebeeebebeeeeeebbbbbbbebbbbbebeeeee--: Contact : bbbb bbb bbbbb bbbb b queryA 364:SRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTM: 463 : *************************************************************************************************: 7b3c_A_1 367:XXXSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTM: 466 SecStr :--- HHHHHHHHH HHHHHHHSEE SS SS EEEESSSS B EE HHHHHHHHHTT S TT S B B TTHHHHHHHGGGG : ExpBur :---eebeebbbebbbbebeeebeebebeebebebbbbeeeeeeeeebeeeeebeebeebbeeeebbeeebebeeebebeeeebebbbebbbebebbeebb: Contact : b b bbbbb b bbbbbbb b b bb b b b queryA 464:CDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSIC: 563 :****************************************************************************************************: 7b3c_A_1 467:CDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSIC: 566 SecStr : HHHHHHHHHHHHHHTSSS GGG S SSSB TTHHHH BHHHHHHHS HHHHHHHHHHHTTS EEEEEE BSSSS EEEE HH: ExpBur :bbbbbbbbbbbbbbebbeebebbbbebeebeeeeeeeebbbbbeeebebeebbeebeeeebeebbebbbebbbbbbbebebeeebeeeeebebebebbbb: Contact : b bb b queryA 564:STMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVL: 663 :****************************************************************************************************: 7b3c_A_1 567:STMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVL: 666 SecStr :HHHHHHHHHHHHHHHHHT SSSSB TT STTTHHHHHHHHHTSS SSEEEEEE TTHHHH HHHHHHHHHHHHTT TTTS HHHHHHHHHHHHHHTT: ExpBur :bbbbbebbbbebbeebeeeeebbbbbebeeeebbbbebbeebbeebeeeebbbbebeebebbbbbbbbbbbbbbbbbebeeebeeeebbbbbbbbbbbbb: queryA 664:SEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAV: 763 :****************************************************************************************************: 7b3c_A_1 667:SEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAV: 766 SecStr :S EEEETTEEEE SS TT TTHHHHHHHHHHHHHHHHHHHHHHHS SSS HHHHHHHHHHHHHHHT S HHHHHHHHHHHHHHEEEEEETTEEE: ExpBur :bbbbbbebbbbebebbbbeebebeebbbbbbbbbbbbbbbbbbbbbbebeebeeeebbebbbebbebbbeeeeeeeebbeebbebbeebbbbbbebeebb: Contact : b queryA 764:VCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLA: 863 :****************************************************************************************************: 7b3c_A_1 767:VCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLA: 866 SecStr :EEEEHHHHHTTSS HHHHHHHHHHTT SSS EEES TTT S BTTBEEEEEEETTEEEEEEE HHHHHHHHHEESSSGGG TTT SSHHHHHH: ExpBur :bbbbeebbeeebbbeeebbbbbbbbbbbbbbeeeebbeeeebeebbeebeebebbebebeeeebbbbbbebbebbbbbbbbeeeeeeebeeebeebbebb: queryA 864:IDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHT: 929 :********************************* ********************: 7b3c_A_1 867:IDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTXXXXXXXXXXXXXDNTSRYWEPEFYEAMYTPHT: 932 SecStr :HHHGGGGGSSSHHHHHHHHHHHHHHHHHHHHH ------------- TTHHHHSHHHHHHTTSTT : ExpBur :bebbbbeeeeeeebbebbebbbebbeebbeeee-------------eeebeebeeeebeebbeeee: |