Protein Model on 6sa8 assembly_id=1
(TEMPLATE: 
6sa8
assembly_id:1
)Protein Model on 6sa8 assembly_id=1
(TEMPLATE: 6sa8
assembly_id:1
)| CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
|
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(IMA1_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [665 aa] | ring-like DARPin-Armadillo fusion H83_D01 | |
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [10 aa] | LYS-ARG-LYS-ARG-LYS-ARG-LYS-ARG-LYS-ARG | 149S 150G 184W 187G(S) 188N 191G(S) 192D(G) 197R(I) 228N(E) 231W 234S 235N 238R(S) 239N(G) 270D(E) 273W 276S 277Y(N) 280D(S) 281G 282P(G) 283N 312P(E) 315R(W) 318G(S) 319N 321V(A) 322T(S) 323G 328T(I) 354E 357W 360S 361N 364A(S) 396E (identity: 50.0 %/39.9 %) | |
| 3 | c | C 1 (A) | non-polymer(EDO) | 1,2-ETHANEDIOL | 128L 129G(S) 166A 169S(Q) 170L (identity: 60.0 %/39.9 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:6sa8_A_1 identity=39.9% |
queryA 87:SSNVENQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGRTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWAL: 186
:** ** ** * * ** * * * * * *** ***** ** ** * ** ** ** ** * * ***:
6sa8_A_1 188:SSPNENELQNALWTLGNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQ-EALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWAL: 286
SecStr :T S HHHHHHHHHHHHHHHTS HHHHHHHHHTTHHHHHHHGGG S HHHHH-HHHHHHHHHTTS HHHHHHHHHTT HHHHHHHTT S HHHHHHHHHHH:
ExpBur :ebeeeeebbebbeebbeebeeeeeebeebbeeebbebbbebbebeeeebbe-bbbebbbbbbebeeebbeebbeeebbeebbebbebeeeebbebbbebb:
Contact : cc bb c cc b
queryA 187:GNIAGDGSVFRDLVIKYGAVDPLLALLAVPDMSSLACGYLRNLTWTLSNLCRNKNPA--PPIDAVEQILPTLVRLLHHDDPEVLADTCWAISYLTDGPNE: 284
: *** * ** ** * ** * * * *** * *** ** ** ** * ** * * **:
6sa8_A_1 287:SNIASGGNEQIQAVIDAGALPALVQLLSSPNEQ-----ILQEALWALSNIASGGNEQIQAVIDA--GALPALVQLLSSPNEQILQEALWALSNIASGGNE: 379
SecStr :HHHTTS HHHHHHHHHTTHHHHHHHHTT S HH-----HHHHHHHHHHHHTTS HHHHHHHHHT--THHHHHHHHTT S HHHHHHHHHHHHHHTTS HH:
ExpBur :bebbebeeebbbebbeeebbeebbebbeeeeee-----bbbbbbebbbbbbebeeebbebbbee--ebbebbbebbebeeeebbbbbbebbbbbbebeee:
Contact :bb bb b b b bb bb b b b bb bbbb
queryA 285:RIGMVVKTGVVPQLVKLLGASELPIVTPALRAIGNIVTGTDEQTQVVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVS: 384
: * * * * ** ** * ** * ** * ** * ******* ** * * ** * *** * *** * * * ** :
6sa8_A_1 380:QIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQ: 479
SecStr :HHHHHHHTTHHHHHHHGGG S HHHHHHHHHHHHHHTTS HHHHHHHHHTT HHHHHHGGG S HHHHHHHHHHHHHHHTS HHHHHHHHHTTHHHHHHH:
ExpBur :bbebbbeeebbeebbebbebeeeebbbbbbebbbbbbebeeebbbbbbeeebbeebbebbebebeebbbbbbebbbebbebeeebbebbbeeebbebbbe:
Contact : b b bb bbb b b b bb b
queryA 385:VLSKADFKTQKEAVWAVTNYTSGGTVEQ: 412
: ** * ** * * *:
6sa8_A_1 480:LLSSPNEQIQDEAEKTLLNIANGSEEQQ: 507
SecStr :HTT S HHHHHHHHHHHHHHHTS HHHH:
ExpBur :bbebebeebbeebbebbebbbeeeeebe:
Contact : b
|
[help]