Protein Model on 6s9m assembly_id=1
(TEMPLATE: 
6s9m
assembly_id:1
)Protein Model on 6s9m assembly_id=1
(TEMPLATE: 6s9m
assembly_id:1
)| CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
|
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(IMA1_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [300 aa] | Lock2_KRKRKAKITW | |
| 2 | b | G 1 (A) | non-polymer(CA) | CALCIUM ION | 305S(P) 307L(E) (identity: 0.0 %/40.3 %) | |
| 3 | c | H 1 (A) | non-polymer(CA) | CALCIUM ION | 347P 349T(E) (identity: 50.0 %/40.3 %) | |
| 4 | d | I 1 (A) | non-polymer(CA) | CALCIUM ION | 389A(P) 391F(E) (identity: 0.0 %/40.3 %) | |
| 5 | e | J 1 (A) | non-polymer(CA) | CALCIUM ION | 432K(P) 434T(E) (identity: 0.0 %/40.3 %) | |
| 6 | f | K 1 (A) | non-polymer(EDO) | 1,2-ETHANEDIOL | ||
| 7 | g | L 1 (A) | non-polymer(EDO) | 1,2-ETHANEDIOL | 329Q 332I 368D(E) 372Q(A) (identity: 50.0 %/40.3 %) | |
| 8 | h | M 1 (A) | non-polymer(EDO) | 1,2-ETHANEDIOL | 311T(Q) 312P(F) 315R(I) (identity: 0.0 %/40.3 %) | |
| 9 | i | N 1 (A) | non-polymer(EDO) | 1,2-ETHANEDIOL | 417V(I) 423E(P) (identity: 0.0 %/40.3 %) | |
| 10 | j | O 1 (A) | non-polymer(CA) | CALCIUM ION | 263D(P) 265P(E) (identity: 0.0 %/40.3 %) | |
| 11 | k | P 1 (A) | non-polymer(CA) | CALCIUM ION | ||
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:6s9m_A_1 identity=40.3% |
queryA 253:LPTLVRLLHHDDPEVLADTCWAISYLTDGPNERIGMVVKTGVVPQLVKLLGASELPIVTPALRAIGNIVTGTDEQTQVVIDAGALAVFPSLLTNPKTNIQ: 352
:** ** ** ** * * ** * * * * ** ** * ** * ** * ** * ******* ** * * :
6s9m_A_1 48:LPALVQLLSSPNEQILASALGALANIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQFALIALANIASGGNEQIQAVIDAGALPALVQLLSSPNEQIL: 147
SecStr :HHHHHHHTT S HHHHHHHHHHHHHHTTS HHHHHHHHHTTHHHHHHHHTT S HHHHHHHHHHHHHHTTS HHHHHHHHHTTHHHHHHHHTT S HHHH:
ExpBur :bebbbebbebeeeebbbbbbbbbbbbbbbeeebbbebbeeebbebbbebbebeeeebbbbbbbbbbbbbbbeeebbbbbbeeebbebbbebbeeeeeebb:
Contact : j j b b hh h g g c c
queryA 353:KEATWTMSNITAGRQDQIQQVVNHGLVPFLVSVLSKADFKTQKEAVWAVTNYTSGGTVEQIVYLVHCGIIEPLMNLLTAKDTKIILVILDAISNIFQAAE: 452
: ** * *** * *** * * * ** ** ** ** * *** *** * * ** * * * *** :
6s9m_A_1 148:QEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGN-EQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASG--: 244
SecStr :HHHHHHHHHHTTS HHHHHHHHHTTHHHHHHHHTT S HHHHHHHHHHHHHHTTS H-HHHHHHHHTTHHHHHHHHTT S HHHHHHHHHHHHHHTTS--:
ExpBur :bbbbbbbbbbbbbbeebbeebbeeebbeebbebbebeeeebbbbbbbbbbbbbbbee-ebbbbbbeeebbebbbebbebeeeebbebbbebbbbbbbb--:
Contact : g g d d i i e e
queryA 453:KLGETEKLSIMIEECGGLDKIEALQNHENESVYKASLSLIEKYFS: 497
: * * * * * * * ** **** * ** *:
6s9m_A_1 245:--GNEQKQA--VKEAGALEKLEQLQSHENEKIQKEAQEALEKLQS: 285
SecStr :-- HHHHHH--HHHTTHHHHHHHHTT SSHHHHHHHHHHHHHHHS:
ExpBur :--beebbee--beeeebeeebeebeeeeeeebeebbeebbebbee:
|
[help]