Protein Model on 5mfj assembly_id=1
(TEMPLATE: 
5mfj
assembly_id:1
)Protein Model on 5mfj assembly_id=1
(TEMPLATE: 5mfj
assembly_id:1
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| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | b(query A) |
| 1 | a | A 1 (A) | polymer(polypeptide(L)) [239 aa] | YIII(Dq.V2)4CqI | 283N 284E 324T(N) 325D(N) 366R(N) 367Q(N) 368D(E) 408G(N) 409T(N) 411E 457T(N) (identity: 27.3 %/34.9 %) | |
| 2 | b | A(IMA1_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [240 aa] | YIII(Dq.V2)4CqI | |
| 3 | c | C 1 (C) | polymer(polypeptide(L)) [6 aa] | (KR)5 | ||
| 4 | d | D 1 (D) | polymer(polypeptide(L)) [10 aa] | (KR)5 | 365G 366R(N) 367Q(N) 370I 406S 407G 408G(N) 409T(N) 413I 439V(E) 442D(W) 445S(A) 446N 449Q(S) 455G 483S(E) 487A(N) 490S(A) (identity: 38.9 %/34.9 %) | |
| ALIGNMENTS |
| MODEL[2] Protein A "queryA" TEMPLATE:5mfj_B_1 identity=34.9% |
queryA 253:LPTLVRLLHHDDPEVLADTCWAISYLTDGPNERIGMVVKTGVVPQLVKLLGASELPIVTPALRAIGNIVTGTDEQTQVVIDAGALAVFPSLLTNPKTNIQ: 352
:** * * * * * * ** * * ***** * ** ** * ** * * **** ** :
5mfj_B_1 6:LPQMVQQLNSPDQQELQSALRKLSQIASGGNEQIQKLIEAGALSPLVKLLDDASEEVIXEAVWAIANIASGNNEQIQKLIEAGALSPLVKLLDDASEEVI: 105
SecStr :HHHHHHHTT S HHHHHHHHHHHHHHHTS HHHHHHHHHTT HHHHHHGGG S TTT - HHHHHHHHTTS HHHHHHHHHTT HHHHHHHHHHS HHHH:
ExpBur :beebbebbebeeeeebbebbeebbebbeeeeeebeebbeeebbeebbebbeeeeeebb-ebbebbbbbbebeeebbeebbeeebbeebbebbeeeeeebb:
Contact : aa aa
queryA 353:KEATWTMSNITAGRQDQIQQVVNHGLVPFLVSVLSKADFKTQKEAVWAVTNYTSGGTVEQIVYLVHCGIIEPLMNLLTAKDTKIILVILDAISNIFQAAE: 452
: ** * ** * *** * ** * * ***** * ** *** * * ** ** * ** ** :
5mfj_B_1 106:QEAVWAIANIASGNNEQIQKLIEAGALSPLVKLLDDASEEVIQEAVWAIANIASGNN-EQIQKLIEAGALSPLVKLLDDASEEVIQEAVWAIANIAS---: 201
SecStr :HHHHHHHHHHHTS HHHHHHHHHTT HHHHHHTTTSS HHHHHHHHHHHHHHHTS H-HHHHHHHHTT HHHHHHGGG S HHHHHHHHHHHHHHHT---:
ExpBur :bebbebbbbbbebeeebbeebbeeebbeebbebbeeeeeebbebbbebbbbbbebee-ebbeebbeeebbebbbebbebeeeebbeebbebbbbbbe---:
Contact : daaa d ddaa a d d d dd d
Contact : dd dd
queryA 453:KLGETEKLSIMIEECGGLDKIEALQNHENESVYKASLSLIEKYFS: 497
: * * ** * * ** ** * * * *:
5mfj_B_1 202:--GNNEQIQ-KLEEAGAEPALEKLQSSPNEEVQKNAQAALEALNS: 243
SecStr :--S HHHHH-HHHHTTHHHHHHHTSS S HHHHHHHHHHHHHH :
ExpBur :--beeebbe-ebeeeebeeebeebeebeeeebeebbeebbebbee:
Contact : d a d d d
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