Protein Model on 5mfi assembly_id=1 (TEMPLATE: 5mfi assembly_id:1 )

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description b(query A)
1 a A 1 (A) polymer(polypeptide(L)) [239 aa] YIII(Dq.V2)4CqI 283N 284E 324T(N) 325D(N) 326E 366R(N) 367Q(N) 368D(E) 408G(N) 409T(N) 411E 456E(N) 457T(N) (identity: 30.8 %/34.9 %)
2 b A(IMA1_HUMAN) B 1 (B) polymer(polypeptide(L)) [240 aa] YIII(Dq.V2)4CqI
3 c C 1 (C) polymer(polypeptide(L)) [8 aa] (KR)4
4 d D 1 (D) polymer(polypeptide(L)) [6 aa] (KR)4 365G 366R(N) 367Q(N) 370I 406S 407G 408G(N) 409T(N) 413I 439V(E) 442D(W) 445S(A) 446N 449Q(S) 455G 483S(E) 487A(N) (identity: 41.2 %/34.9 %)
ALIGNMENTS
MODEL[2] Protein A "queryA" TEMPLATE:5mfi_B_1 identity=34.9%
queryA       253:LPTLVRLLHHDDPEVLADTCWAISYLTDGPNERIGMVVKTGVVPQLVKLLGASELPIVTPALRAIGNIVTGTDEQTQVVIDAGALAVFPSLLTNPKTNIQ: 352
                :**  *  *   *   *       *    * ** *      *    *****          *  ** **  *  ** *  * ****     **        :
5mfi_B_1       6:LPQMVQQLNSPDQQELQSALRKLSQIASGGNEQIQKLIEAGALSPLVKLLDDASEEVIQEAVWAIANIASGNNEQIQKLIEAGALSPLVKLLDDASEEVI: 105
SecStr          :HHHHHHHTT S HHHHHHHHHHHHHHHTS HHHHHHHHHTT HHHHHHTTTSS HHHHHHHHHHHHHHTTS HHHHHHHHHTT HHHHHHHTSSS HHHH:    
ExpBur          :beebbebbebeeeeebbebbeebbebbeeeeeebeebbeeebbebbbebbeeeeeebbbbbbebbbbbbebeeebbeebbeeebbebbbebbeeeeeebb:    
Contact         :                              aa                                       aaa                          

queryA       353:KEATWTMSNITAGRQDQIQQVVNHGLVPFLVSVLSKADFKTQKEAVWAVTNYTSGGTVEQIVYLVHCGIIEPLMNLLTAKDTKIILVILDAISNIFQAAE: 452
                : ** *   **  *   ***     *    **  *  *      *****  *  **   ***  *   *   **  **       *     ** **     :
5mfi_B_1     106:QEAVWAIANIASGNNEQIQKLIEAGALSPLVKLLDDASEEVIQEAVWAIANIASGNN-EQIQKLIEAGALSPLVKLLDDASEEVIQEAVWAIANIAS---: 201
SecStr          :HHHHHHHHHHTTS HHHHHHHHHTT HHHHHHTTTSS HHHHHHHHHHHHHHHTS H-HHHHHHHHTT HHHHHHGGG S HHHHHHHHHHHHHHHT---:    
ExpBur          :bbbbebbbbbbebeeebbeebbeeebbebbbebbeebeeebbebbbebbbbbbebee-ebbeebbeeebbebbbebbebeeeebbeebbebbbbbbe---:    
Contact         :            daaa d                                   ddaa a d                         d  d  dd  d   
Contact         :             dd                                        dd                                           

queryA       453:KLGETEKLSIMIEECGGLDKIEALQNHENESVYKASLSLIEKYFS: 497
                :  *  *      ** *     * **   ** * *      *   *:
5mfi_B_1     202:--GNNEQIQ-KLEEAGAEPALEKLQSSPNEEVQKNAQAALEALNS: 243
SecStr          :--S HHHHH-HHHHTTHHHHHHHGGG S HHHHHHHHHHHHHH  :    
ExpBur          :--beeebbe-ebeebebeebbeebeebeeeebeebbeebbeebee:    
Contact         :  daa                         d   d                                                                 


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