Protein Model on 5mff assembly_id=1
(TEMPLATE: 
5mff
assembly_id:1
)Protein Model on 5mff assembly_id=1
(TEMPLATE: 5mff
assembly_id:1
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| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(IMA1_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [280 aa] | YIIIM5AII | |
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [280 aa] | YIIIM5AII | 149S 150G 151T(G) 152S(N) 191G(S) 192D(G) 193G 194S(N) 239N 242P(I) 265P(E) 266E(Q) 280D(S) 282P(G) 307L(E) 308P(Q) 349T(E) 350N(Q) 390D(N) 391F(E) 392K 395K (identity: 27.3 %/40.5 %) | |
| 3 | c | E 1 (E) | polymer(polypeptide(L)) [10 aa] | (RR)5 | 180E(Q) 181Q(E) 184W 227R(Q) 228N(E) 231W 270D(E) 273W 312P(E) 315R(W) 353K(Q) 354E 357W (identity: 38.5 %/40.5 %) | |
| 4 | d | G 1 (A) | non-polymer(EDO) | 1,2-ETHANEDIOL | 366R(G) 367Q(N) (identity: 0.0 %/40.5 %) | |
| 5 | e | H 1 (A) | non-polymer(EDO) | 1,2-ETHANEDIOL | 384S(Q) 387S 388K(H) (identity: 33.3 %/40.5 %) | |
| 6 | f | I 1 (B) | non-polymer(EDO) | 1,2-ETHANEDIOL | 349T(E) 353K(Q) 390D(N) (identity: 0.0 %/40.5 %) | |
| 7 | g | J 1 (B) | non-polymer(EDO) | 1,2-ETHANEDIOL | 150G 151T(G) (identity: 50.0 %/40.5 %) | |
| 8 | h | K 1 (B) | non-polymer(EDO) | 1,2-ETHANEDIOL | ||
| 9 | i | S 1 (E) | non-polymer(EDO) | 1,2-ETHANEDIOL | ||
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:5mff_A_1 identity=40.5% |
queryA 121:IPKFVSFLGRTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSVFRDLVIKYGAVDPLLALLAVPDMSS: 220
: * * * * * * **** ** ** * ** ** ** ** * * *** *** * ** ** * ** * :
5mff_A_1 6:LPQMVQQLNSPDQQELQ-SALRKLSQIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQ-: 103
SecStr :HHHHHHHTT S HHHHH-HHHHHHHHHHTS HHHHHHHHHTTHHHHHHHGGG S HHHHHHHHHHHHHHTTS HHHHHHHHHTTHHHHHHHGGG S HH-:
ExpBur :eeebbebbebeeeeebb-ebbeebbebbeeeeeebeebbeeebbebbbebbebebeebbbebbebbbbbbebbeebbbbbbeeebbebbbebbebeeee-:
Contact : bbbb cc c bbbb
Contact : gg
queryA 221:LACGYLRNLTWTLSNLCR--NKNPAPPIDAVEQILPTLVRLLHHDDPEVLADTCWAISYLTDGPNERIGMVVKTGVVPQLVKLLGASELPIVTPALRAIG: 318
: * * *** * *** ** ** ** * ** * * ** * * * * ** ** * ** * :
5mff_A_1 104:----ILQEALWALSNIASGGNEQIQAVIDAG--ALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALS: 197
SecStr :----HHHHHHHHHHHHTTS HHHHHHHHHTT--HHHHHHHGGG S HHHHHHHHHHHHHHTTS HHHHHHHHHTTHHHHHHHGGG S HHHHHHHHHHHH:
ExpBur :----bbebbbebbbbbbebeeebbbbbbeee--bbebbbebbebebeebbebbbebbbbbbebeeebbbbbbeeebbebbbebbebeeeebbbbbbebbb:
Contact : cc c b b b bb c c b b bb c c
queryA 319:NIVTGTDEQTQVVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVSVLSKADFKTQKEA: 397
:** * ** * ******* ** * * ** * *** * * * * * * * * ****:
5mff_A_1 198:NIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQKQAVKEAGALEKLEQLQSHENEKIQKEA: 276
SecStr :HHTTS HHHHHHHHHTTHHHHHHHHTT S HHHHHHHHHHHHHHHTS HHHHHHHHHTTHHHHHHHHTT SSHHHHHHH:
ExpBur :bbbebeeebbbbbbeeebbebbbebbebeeeebbebbbebbbbbbebeeebbebbeeeebeeebeebeeeeeeebeebb:
Contact : bb cc c dd e ee bbb b
Contact : f f f
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