Protein Model on 5ekg assembly_id=1
(TEMPLATE: 
5ekg
assembly_id:1
)Protein Model on 5ekg assembly_id=1
(TEMPLATE: 5ekg
assembly_id:1
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| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | c(query A) |
| 1 | a | A 1 (B) | polymer(polypeptide(L)) [5 aa] | XPG2 peptide | 280D 281G 283N 286I 319N 321V 322T 323G 328T 357W 360S 361N 364A 396E 399W 403N 406S 407G (identity: 100.0 %/94.4 %) | |
| 2 | b | B 1 (C) | polymer(polypeptide(L)) [9 aa] | XPG2 peptide | 104L 105S 106R 107E 110P 138F 142W 146N 148A 149S 150G 151T 155T 181Q 184W 188N 191G 192D 228N 231W 235N 238R (identity: 100.0 %/94.4 %) | |
| 3 | c | A(IMA1_HUMAN) | C 1 (A) | polymer(polypeptide(L)) [425 aa] | Importin subunit alpha-1 :IMA1_MOUSE | |
| ALIGNMENTS |
| MODEL[3] Protein A "queryA" TEMPLATE:5ekg_C_1 identity=94.4% |
queryA 72:GTVNWSVDDIVKGINSSNVENQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGRTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLL: 171
:******* ******** * * ************************************* *****************************************:
5ekg_C_1 53:GTVNWSVEDIVKGINSNNLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLL: 152
SecStr : SS HHHHHHHHTSS HHHHHHHHHHHHHHHT SS HHHHHHTT HHHHHHHHT TT HHHHHHHHHHHHHHHTS HHHHHHHHHTTHHHHHHHHT:
ExpBur :ebeeeeeeebeeebeeeeeeebeebbebbbebbeeeeeebbeebeeeebbeebbebbeeeebeebbbbbbebbbbbbeeeeebbebbbeeebbebbbebb:
Contact : bbbb b b b b bbbb b
queryA 172:ASPHAHISEQAVWALGNIAGDGSVFRDLVIKYGAVDPLLALLAVPDMSSLACGYLRNLTWTLSNLCRNKNPAPPIDAVEQILPTLVRLLHHDDPEVLADT: 271
:*********************** ******* ** *********** * ************************* **************** ******* :
5ekg_C_1 153:ASPHAHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLLHHNDPEVLADS: 252
SecStr :T S HHHHHHHHHHHHHHHHT HHHHHHHHHTT HHHHHHHS S GGGS HHHHHHHHHHHHHTT SS HHHHHHHHHHHHHHTTSS HHHHHHH:
ExpBur :ebeeeebbebbbebbbbbbeebbebbeebbeeebbeebbebbeeeebeebeeebbebbbebbbbbbeeeeeebeeebbeebbebbeebbebebeebbbeb:
Contact : b b b bb b b b b
queryA 272:CWAISYLTDGPNERIGMVVKTGVVPQLVKLLGASELPIVTPALRAIGNIVTGTDEQTQVVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQ: 371
:*************** **** ************ ************************ *****************************************:
5ekg_C_1 253:CWAISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQ: 352
SecStr :HHHHHHHHSS HHHHHHHHTTT HHHHHHHHT S HHHHHHHHHHHHHHTTS HHHHHHHHHTTGGGGHHHHHT SSHHHHHHHHHHHHHHTTS HHHHH:
ExpBur :bebbbebbeeeeebbeebbeeebbeebbebbeeeeeebbebbbebbbbbbebeeebbeebbeeebbebbeebbebebeebbebbbebbbebbeeeeebbe:
Contact : aa a a a aaa a a aa a
queryA 372:QVVNHGLVPFLVSVLSKADFKTQKEAVWAVTNYTSGGTVEQIVYLVHCGIIEPLMNLLTAKDTKIILVILDAISNIFQAAEKLGETEKLSIMIEECGGLD: 471
:************ ************* ** **************************** ******* *********************************:
5ekg_C_1 353:QVVNHGLVPFLVGVLSKADFKTQKEAAWAITNYTSGGTVEQIVYLVHCGIIEPLMNLLSAKDTKIIQVILDAISNIFQAAEKLGETEKLSIMIEECGGLD: 452
SecStr :HHHHTT HHHHHHHHHSS HHHHHHHHHHHHHHHHH HHHHHHHHHTT HHHHHHGGG S SHHHHHHHHHHHHHHHHHHTTT HHHHHHHHHHTTHHH:
ExpBur :ebbeeebbeebbebbeeeeebbbbebbebbbbbbeeeeeebbeebbeeebbebbbebbebeeeebbebbbebbebbbeebeeeeeeeebbeebeeeebee:
Contact : a a a aa
queryA 472:KIEALQNHENESVYKASLSLIEKYF: 496
:****** *********** ******:
5ekg_C_1 453:KIEALQRHENESVYKASLNLIEKYF: 477
SecStr :HHHTTSSSS HHHHHHHHHHHHHH :
ExpBur :bbeebeeeeeeebbeebeebeeeee:
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