CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
|
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(IMA1_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [422 aa] | IMPORTIN SUBUNIT ALPHA-1A :IMA1A_ORYSJ | |
2 | b | C 1 (C) | polymer(polypeptide(L)) [9 aa] | B54NLS | 280D 281G 283N 286I 315R 319N 321V 322T 323G 328T 354E 357W 360S 361N 364A 396E 399W 402T(S) 403N 406S 435K(R) 438L(T) 439V 442D(E) 446N 483S(E) (identity: 80.8 %/52.3 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:2yns_A_1 identity=52.3% |
queryA 77:SVDDIVKGINSSNVENQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGRTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHA: 176 :* * * ** ** ***** * *** * * * ** ** * * *** ************* ** * * ** * * ** * : 2yns_A_1 37:SLPAMIGGVYSDDNNLQLEATTQFRKLLSIERSPPIEEVIQSGVVPRFVQFLTREDFPQLQFEAAWALTNIASGTSENTKVVIDHGAVPIFVKLLGSSSD: 136 SecStr : HHHHHHHHTSS HHHHHHHHHHHHHHHS SS HHHHHHTT HHHHHHHTT TT HHHHHHHHHHHHHHTTS HHHHHHHHHTTHHHHHHHGGG S H: ExpBur :eeeebeebbebeeeeebbebbeebbeebeeeeeeebeebbebebbebbbebbebeebeebbbbbbebbbbbbeeeeebbeebeeeebbeebbebbebebe: queryA 177:HISEQAVWALGNIAGDGSVFRDLVIKYGAVDPLLALLAVPDMSSLACGYLRNLTWTLSNLCRNKNPAPPIDAVEQILPTLVRLLHHDDPEVLADTCWAIS: 276 : ********* *** **** ** **** * * *** ****** ** * * * ** * ** * * *** * *** *: 2yns_A_1 137:DVREQAVWALGNVAGDSPKCRDLVLANGALLPLLAQLNEHTKLSM----LRNATWTLSNFCRGK-PQPSFEQTRPALPALARLIHSNDEEVLTDACWALS: 231 SecStr :HHHHHHHHHHHHHHTS HHHHHHHHHTT HHHHHHT STT HHH----HHHHHHHHHHHH SS-S HHHHTTHHHHHHHHTT HHHHHHHHHHHH: ExpBur :ebbbbbbebbbbbbeeeeebbeebbeeebbeebbeebeeebeeeb----eebbbebbbbbbeee-eebebeebeebbebbbebbeeebeebbbbbbebbb: queryA 277:YLTDGPNERIGMVVKTGVVPQLVKLLGASELPIVTPALRAIGNIVTGTDEQTQVVIDAGALAVFPSLLT-NPKTNIQKEATWTMSNITAGRQDQIQQVVN: 375 :** ** * * * ** * ** ** **** ****** * *** ** ** **** * * * *** ** ****** **** * *: 2yns_A_1 232:YLSDGTNDKIQAVIEAGVCPRLVELLLHPSPSVLIPALRTVGNIVTGDDAQTQCIIDHQALPCLLSLLTQNLKKSIKKEACWTISNITAGNKDQIQAVIN: 331 SecStr :HHTSSSHHHHHHHHHTT HHHHHHGGG S HHHHHHHHHHHHHHTTS HHHHHHHHTTTHHHHHHHHHHS HHHHHHHHHHHHHHTTS HHHHHHHHH: ExpBur :bbbeeeeebbebbbeeebbebbbebbeeebeebbebbbebbbbbbebeeebbeebbeeebbebbbebbeeeeeeebbebbbebbbebbebeeebbeebbe: Contact : bb b b b b bbb b b b bb b queryA 376:HGLVPFLVSVLSKADFKTQKEAVWAVTNYTSGGTVEQIVYLVHCGIIEPLMNLLTAKDTKIILVILDAISNIFQAAEKLGETEK---------LSIMIEE: 466 : * ** * * * *** ** * **** ** *** * * ** ** * * * * ** * *** * * ** *: 2yns_A_1 332:AGIIGPLVNLLQTAEFDIKKEAAWAISNATSGGSHDQIKYLVSEGCIKPLCDLLICPDIRIVTVCLEGLENIL----KVGETDKTLAAGDVNVFSQMIDE: 427 SecStr :TT HHHHHHHHHHS HHHHHHHHHHHHHHHHH HHHHHHHHHTT HHHHHHGGGSS HHHHHHHHHHHHHHH----HHHHHHHHHTT SS HHHHHHHH: ExpBur :eebbeebbebbeebeeebeeebbebbbbbbeebeeebbeebbeeebbebbbebbebeeeebbbbbbebbbbbb----ebbeebeeeeeeeebebbeebee: Contact : b b bb b b bb b b queryA 467:CGGLDKIEALQNHENESVYKASLSLIEKYF: 496 : ** *** ** * * * * * : 2yns_A_1 428:AEGLEKIENLQSHDNNEIYEKAVKILEAYW: 457 SecStr :TTHHHHHHHGGG S HHHHHHHHHHHHHH : ExpBur :bebbebbeebeeeeeeebeebbbebbeebe: Contact : b |