Protein Model on 2c1t assembly_id=1 (TEMPLATE: 2c1t assembly_id:1 )

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(IMA1_HUMAN) A 1 (A) polymer(polypeptide(L)) [423 aa] IMPORTIN ALPHA SUBUNIT :IMA1_YEAST
2 b C 1 (C) polymer(polypeptide(L)) [36 aa] NUCLEOPORIN NUP2 :NUP2_YEAST 231W 234S 235N 238R 239N(G) 240K 270D 273W 277Y 280D 311T 315R 321V 322T 323G 328T 348K 350N 357W 360S 361N 364A 396E 399W 432K(A) 434T(N) 470L(M) 471D(E) 474E(F) 477Q 478N(Q) 479H(N) 480E 482E(D) 485Y 489L(Y) 492I 496F (identity: 73.7 %/49.6 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:2c1t_A_1 identity=49.6%
queryA        81:IVKGINSSNVENQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGRTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISE: 180
                :     **     ** **   *  ****  ****  * **  *  * *         * * ************ *** ***  * * ** **        *:
2c1t_A_1       5:MTQQLNSDDMQEQLSATVKFRQILSREHRPPIDVVIQAGVVPRLVEFMRENQPEMLQLEAAWALTNIASGTSAQTKVVVDADAVPLFIQLLYTGSVEVKE: 104
SecStr          :HHHHTT S HHHHHHHHHHHHHHTT SSS  HHHHHHTT HHHHHHTTSTTS HHHHHHHHHHHHHHHTS HHHHHHHHHTT HHHHHHHHHHS HHHHH:    
ExpBur          :bbebbeeeeeeebeebbeebbeebeeeeeebbeebbeeebbebbbebbeeeeeeebbbbbbebbbbbbeeeeebbeebbeeebbebbbebbeebeeebee:    

queryA       181:QAVWALGNIAGDGSVFRDLVIKYGAVDPLLALLAVPDMSSLACGYLRNLTWTLSNLCRNKNPAPPIDAVEQILPTLVRLLHHDDPEVLADTCWAISYLTD: 280
                :** ***** ***    ** *    *  * * *       *      *  ********* * * *    * * ****  *    * * * * ******* *:
2c1t_A_1     105:QAIWALGNVAGDSTDYRDYVLQCNAMEPILGLF-----NSNKPSLIRTATWTLSNLCRGKKPQPDWSVVSQALPTLAKLIYSMDTETLVDACWAISYLSD: 199
SecStr          :HHHHHHHHHHHH HHHHHHHHHTT HHHHHGGG-----GS  HHHHHHHHHHHHHHH  STT   HHHHGGGHHHHHHHTT S HHHHHHHHHHHHHHHS:    
ExpBur          :bbbebbbebbbeeeebbeebbeeebbebbbebb-----eeeeebbbebbbebbbbbbeeeeeebeeeebbebbebbbebbeeeeeebbbbbbebbbebbe:    
Contact         :                                                  b  bb  bbb                             b  b   b  b

queryA       281:GPNERIGMVVKTGVVPQLVKLLGASELPIVTPALRAIGNIVTGTDEQTQVVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVP: 380
                :** * *  *        ** **        ****** ****** * ****** ** *     **  ** ** *** ** ******   *** *    * *:
2c1t_A_1     200:GPQEAIQAVIDVRIPKRLVELLSHESTLVQTPALRAVGNIVTGNDLQTQVVINAGVLPALRLLLSSPKENIKKEACWTISNITAGNTEQIQAVIDANLIP: 299
SecStr          :S HHHHHHHHHTTHHHHHHHHTT S HHHHHHHHHHHHHHTTS HHHHHHHHHTTHHHHHHHHTT SSHHHHHHHHHHHHTTTTS HHHHHHHHHTT HH:    
ExpBur          :eeeebbeebbeeebbebbbebbebeeeebbebbbebbbbbbebeeebbeebbeeebbebbeebbebeebebeebbbebbbebbebebebbeebbeeebbe:    
Contact         :                              b   b     bbb    b                   b b      b  bb  b                

queryA       381:FLVSVLSKADFKTQKEAVWAVTNYTSGGTV--EQIVYLVHCGIIEPLMNLLTAKDTKIILVILDAISNIFQAAEKLGETEKLSI-----MIEECGGLDKI: 473
                : **  *  *  ** *** **  *  ***      * ***  * * **  **   *  ** * ***  **    *   *   * *      **  **  **:
2c1t_A_1     300:PLVKLLEVAEDKTKKEACWAISNASSGGLQRPDIIRYLVSQGCIKPLCDLLEIADNRIIEVTLDALENILKMGEADKEARGLNINENADFIEKAGGMEKI: 399
SecStr          :HHHHHHHHS HHHHHHHHHHHHHHHGGGTT HHHHHHHHHTT HHHHHHHTTSS HHHHHHHHHHHHHHHHHHHHHHHHTT S  HHHHHHHHTTHHHHH:    
ExpBur          :bbbebbeebeeebeeebbebbbbbbebbeeeeebbeebbeeebbebbbebbebeeeebbebbbebbbbbbebbeebbeeeeeeebebbeebeebebeebb:    
Contact         :               b  b                                  b b                                        bb  

queryA       474:EALQNHENESVYKASLSLIEKYF: 496
                :   *  **   *      ** **:
2c1t_A_1     400:FNCQQNENDKIYEKAYKIIETYF: 422
SecStr          :HHGGGSSSHHHHHHHHHHHHHH :    
ExpBur          :eebbebeeeebeebbeebbeebb:    
Contact         :b  bbbb b  b   b  b   b                                                                             


Input Residue Numbers for Focused Sites

ex) 2,15,123