Protein Model on 1q1t assembly_id=1
(TEMPLATE: 
1q1t
assembly_id:1
)Protein Model on 1q1t assembly_id=1
(TEMPLATE: 1q1t
assembly_id:1
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| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | c(query A) |
| 1 | a | A 1 (A) | polymer(polypeptide(L)) [8 aa] | Large T antigen :TALA_SV40 | 280D 281G 283N 286I 315R 319N 321V 322T 323G 328T 354E 357W 360S 361N 364A 396E 399W 403N 406S 407G (identity: 100.0 %/94.4 %) | |
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [11 aa] | Large T antigen :TALA_SV40 | 104L 105S 106R 107E 108K 110P 138F 142W 146N 148A 149S 150G 151T 152S 155T 181Q 184W 187G 188N 191G 192D 231W 235N 238R 239N 270D 273W 277Y (identity: 100.0 %/94.4 %) | |
| 3 | c | A(IMA1_HUMAN) | C 1 (C) | polymer(polypeptide(L)) [427 aa] | Importin alpha-2 subunit :TALA_SV40 | |
| ALIGNMENTS |
| MODEL[3] Protein A "queryA" TEMPLATE:1q1t_C_1 identity=94.4% |
queryA 70:NQGTVNWSVDDIVKGINSSNVENQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGRTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFIS: 169
:********* ******** * * ************************************* ***************************************:
1q1t_C_1 7:NQGTVNWSVEDIVKGINSNNLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFIS: 106
SecStr : GGGSS HHHHHHHHSSS HHHHHHHHHHHHHHTTSSS HHHHHHTT HHHHHHHHT TT HHHHHHHHHHHHHHHTS HHHHHHHHHTTHHHHHHH:
ExpBur :eeebeeeeeeebeebbeeeeeeebbebbbbbbebbeeeeeebbeebeeeebbeebbebbeeeebeebbbbbbebbbbbbeeeeebbebbbeeebbeebbe:
Contact : bbbbb b b b b bbbbb b
queryA 170:LLASPHAHISEQAVWALGNIAGDGSVFRDLVIKYGAVDPLLALLAVPDMSSLACGYLRNLTWTLSNLCRNKNPAPPIDAVEQILPTLVRLLHHDDPEVLA: 269
:************************* ******* ** *********** * ************************* **************** ******:
1q1t_C_1 107:LLASPHAHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLLHHNDPEVLA: 206
SecStr :HTT SSHHHHHHHHHHHHHHHTT HHHHHHHHHTT HHHHHHHT SS GGGS HHHHHHHHHHHHHHT SS HHHHHHHHHHHHHHTT S HHHHH:
ExpBur :bbebeeeebbebbbebbbbbbeebbebbeebbeeebbeebbeebeeeebeebeeebbebbbebbbbbbeeeeeebeeebbeebbebbeebbebebeebbb:
Contact : b b bb bb b b bb
queryA 270:DTCWAISYLTDGPNERIGMVVKTGVVPQLVKLLGASELPIVTPALRAIGNIVTGTDEQTQVVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQ: 369
:* *************** **** ************ ************************ ***************************************:
1q1t_C_1 207:DSCWAISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQ: 306
SecStr :HHHHHHHHHTSSSHHHHHHHHTTT HHHHHHHHT S HHHHHHHHHHHHHHTTS HHHHHHHHHTTGGGGHHHHTT SSHHHHHHHHHHHHHHTTS HHH:
ExpBur :ebbebbbebbeeeeebbebbbeeebbebbbebbeeeeeebbbbbbebbbbbbeeeeebbbebbeeebbebbeebbebeeeebbebbbebbbebbebeeeb:
Contact :b b b aa a a a a aaa a a a aa a
queryA 370:IQQVVNHGLVPFLVSVLSKADFKTQKEAVWAVTNYTSGGTVEQIVYLVHCGIIEPLMNLLTAKDTKIILVILDAISNIFQAAEKLGETEKLSIMIEECGG: 469
:************** ************* ** **************************** ******* *******************************:
1q1t_C_1 307:IQQVVNHGLVPFLVGVLSKADFKTQKEAAWAITNYTSGGTVEQIVYLVHCGIIEPLMNLLSAKDTKIIQVILDAISNIFQAAEKLGETEKLSIMIEECGG: 406
SecStr :HHHHHHTT HHHHHHHHHSS HHHHHHHHHHHHHHHHHS HHHHHHHHHTT HHHHHHGGGSS HHHHHHHHHHHHHHHHHHHTTT HHHHHHHHHHTTS:
ExpBur :beebbeeebbeebbebbeeeeeebbeebbebbbbbbeebeeebbeebbeeebbebbbebbebeeeebbbbbbebbebbbebbeeeeeeeebbeebeeeeb:
Contact : a a a aa
queryA 470:LDKIEALQNHENESVYKASLSLIEKYF: 496
:******** *********** ******:
1q1t_C_1 407:LDKIEALQRHENESVYKASLNLIEKYF: 433
SecStr :HHHHHHHTT SSHHHHHHHHHHHHHH :
ExpBur :beebeebeeeeeeebeeebeebbeebe:
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