Protein Model on 1bk5 assembly_id=1
(TEMPLATE: 
1bk5
assembly_id:1
)Protein Model on 1bk5 assembly_id=1
(TEMPLATE: 1bk5
assembly_id:1
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| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | b(query A) |
| 1 | a | A 1 (A) | polymer(polypeptide(L)) [422 aa] | KARYOPHERIN ALPHA :IMA1_YEAST | 151T 152S 238R 239N(G) 240K 241N(K) 273W 315R 390D(E) 391F(Y) 392K 395K 430T(E) 431A(I) 433D 477Q 478N(Q) 479H(N) 480E 482E(D) 485Y 489L(Y) 493E (identity: 56.5 %/49.6 %) | |
| 2 | b | A(IMA1_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [422 aa] | KARYOPHERIN ALPHA :IMA1_YEAST | |
| 3 | c | C 1 (A) | non-polymer(CO) | COBALT (II) ION | 493E (identity: 100.0 %/49.6 %) | |
| 4 | d | D 1 (B) | non-polymer(CO) | COBALT (II) ION | 150G 192D (identity: 100.0 %/49.6 %) | |
| ALIGNMENTS |
| MODEL[2] Protein A "queryA" TEMPLATE:1bk5_B_1 identity=49.6% |
queryA 81:IVKGINSSNVENQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGRTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISE: 180
: ** ** ** * **** **** * ** * * * * * ************ *** *** * * ** ** *:
1bk5_B_1 4:MTQQLNSDDMQEQLSATVKFRQILSREHRPPIDVVIQAGVVPRLVEFMRENQPEMLQLEAAWALTNIASGTSAQTKVVVDADAVPLFIQLLYTGSVEVKE: 103
SecStr :HHHHHT S HHHHHHHHHHHHHHTT SS HHHHHHTT HHHHHHTTSTTS HHHHHHHHHHHHHHHTS HHHHHHHHHTT HHHHHHHHHH HHHHH:
ExpBur :bbebbebeeeeebeebbeebbebbeeeeeeebeebeeeebbebbbebbeeeeeeebbbbbbebbbbbbeeeeebbeebbeeebbebbbebbeebeeebeb:
Contact : daa
queryA 181:QAVWALGNIAGDGSVFRDLVIKYGAVDPLLALLAVPDMSSLACGYLRNLTWTLSNLCRNKNPAPPIDAVEQILPTLVRLLHHDDPEVLADTCWAISYLTD: 280
:** ***** *** ** * * * * * * * ********* * * * * * **** * * * * * ******* *:
1bk5_B_1 104:QAIWALGNVAGDSTDYRDYVLQCNAMEPILGLF-----NSNKPSLIRTATWTLSNLCRGKKPQPDWSVVSQALPTLAKLIYSMDTETLVDACWAISYLSD: 198
SecStr :HHHHHHHHHHTT HHHHHHHHHTT HHHHHHGG-----GS HHHHHHHHHHHHHHH STT HHHHGGGHHHHHHHTT S HHHHHHHHHHHHHHTS:
ExpBur :bbbebbbbbbeeeeebbeebbeeebbebbbebb-----eeeeeebbebbbebbbbbbeeeeeebeeebbeebbebbbebbeeeeeebbbbbbebbbbbbe:
Contact : d aaaa a
queryA 281:GPNERIGMVVKTGVVPQLVKLLGASELPIVTPALRAIGNIVTGTDEQTQVVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVP: 380
:** * * * ** ** ****** ****** * ****** ** * ** ** ** *** ** ****** *** * * *:
1bk5_B_1 199:GPQEAIQAVIDVRIPKRLVELLSHESTLVQTPALRAVGNIVTGNDLQTQVVINAGVLPALRLLLSSPKENIKKEACWTISNITAGNTEQIQAVIDANLIP: 298
SecStr :S HHHHHHHHHTT HHHHHHGGG S HHHHHHHHHHHHHHTTS HHHHHHHHHTTHHHHHHHHTT S HHHHHHHHHHHHHHHTS HHHHHHHHHTT HH:
ExpBur :eeeebbebbbeeebbebbbebbebeeeebbebbbebbbbbbeeeeebbeebbebebbebbeebbebeeeebeebbbebbbebbeeebebbebbbebebbe:
Contact : a
queryA 381:FLVSVLSKADFKTQKEAVWAVTNYTSGGTV--EQIVYLVHCGIIEPLMNLLTAKDTKIILVILDAISNIFQAAEKLGETEKLSI-----MIEECGGLDKI: 473
: ** * * ** *** ** * *** * *** * * ** ** * ** * *** ** * * * * ** ** **:
1bk5_B_1 299:PLVKLLEVAEYKTKKEACWAISNASSGGLQRPDIIRYLVSQGCIKPLCDLLEIADNRIIEVTLDALENILKMGEADKEARGLNINENADFIEKAGGMEKI: 398
SecStr :HHHHHHHHS HHHHHHHHHHHHHHHHTTTT HHHHHHHHHTT HHHHHHHHHH HHHHHHHHHHHHHHHHHHHHHHHSSS SS HHHHHHHHTTHHHHH:
ExpBur :ebbebbeebeeebbebbbebbbbbbebbeeeeebbeebbeeebbebbbebbeebeeebbbbbbebbbbbbebbbeeeeeeeeeebebbeebeebebeebb:
Contact : aaa a aa a
queryA 474:EALQNHENESVYKASLSLIEKYF: 496
: * ** * ** **:
1bk5_B_1 399:FNCQQNENDKIYEKAYKIIETYF: 421
SecStr :HHGGG S HHHHHHHHHHHHHH :
ExpBur :eebbebeeeebeeebeebbeebb:
Contact : aaaa a a a a
Contact : c
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