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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(AP3A_SARS2) | B 1 (B) | polymer(polypeptide(L)) [192 aa] | ORF3a protein :AP3A_SARS | |
2 | b | D 1 (D) | polymer(polypeptide(L)) [27 aa] | Apolipoprotein A-I :APOA1_HUMAN | 64T(A) 69W 70Q (identity: 66.7 %/74.2 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:8eqs_B_1 identity=74.2% |
queryA 40:SLPFGWLIVGVALLAVFQSASKIITLKKRWQLALSKGVHFVCNLLLLFVTVYSHLLLVAAGLEAPFLYLYALVYFLQSINFVRIIMRLWLCWKCRSKNPL: 139 :******* *** ******* *** * ******* ** * ********* ********** ** ******* **** ** ***** ****** *****: 8eqs_B_1 40:SLPFGWLVIGVAFLAVFQSATKIIALNKRWQLALYKGFQFICNLLLLFVTIYSHLLLVAAGMEAQFLYLYALIYFLQCINACRIIMRCWLCWKCKSKNPL: 139 SecStr : SHHHHHHHHHHHHHHHHHTT SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSHHH: ExpBur :eeeeeeeeebeeebeebeebbeeeeeeeeebbeeebeeeeebeebeeebbebbeeeeeeeeeeeeeeeebeeeeeebeebeeeeeebeebbeebebebbe: Contact : b bb queryA 140:LYDANYFLCWHTNCYDYCIPYNSVTSSIVITSGDGTTSPISEHDYQIGGYTEKWESGVKDCVVLHSYFTSDYYQLYSTQLSTDTGVEHVTFFIYNKIV: 237 :******* **** *********** ** * *** ******* * ***** ** * *** **** *** **** * **** ** *: 8eqs_B_1 140:LYDANYFVCWHTHNYDYCIPYNSVTDTIVVTEGDGXXXXXXKEDYQIGGYSEDRHSGVKDYVVVHGYFTEVYYQLESTQITTDTGIENATFFIFNKLV: 237 SecStr :H SEEEEEE SS EEEEEESS SEEEEEEE ------ EEEETTEEEE S SEEEEE SS EEEEEEEEEE HHHH TT EEEEEEE : ExpBur :bbebeebbbbebeeeebbbbbeeeeeebebbbbee------eeebebeeeebeeebeeeeebbbbbeeeebebeeeeeeeeeeeeeeebeebebeeee: |