Protein Model on 5vnc_D_1_L_1 (TEMPLATE: 5vnc )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[3D template]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query F)
1 a FD 1 (D) polymer(polypeptide(L)) [636 aa] Glycogen [starch] synthase isoform 2 :GYS2_YEAST
2 b L 1 (D) non-polymer(UDP) URIDINE-5'-DIPHOSPHATE 339G 340R 346K 376V 500F 501L 512Y 529E 532G 533Y 534T 537E
FOCUSED TEMPLATE
MODEL[1] TEMPLATE:5vnc_D_1
5vnc_D_1       1:XXXXXXXXXXXXXXXXXXXXXSRDLQNHLLFETATEVANRVGGIYSVLKSKAPITVAQYKDHYHLIGPLNKATYQNEVDILDWKKPEAFSDEMRPVQHAL: 100
SecStr          :---------------------  EEEEEEEEEEETTTTS SSHHHHHHHHHHHHHHHHHTTSEEEEEE  TTTSTTTEE   SSSGGGS STT HHHHHH:    
ExpBur          :---------------------ebebeebbbbbbbbbbbbeeeebeebbbbbbbebbeebeebbbbbbbbeeeeeeebbeeeebeeeebbeeebebbbebb:    

5vnc_D_1     101:QTMESRGVHFVYGRWLIEGAPKVILFDLDSVRGYSNEWKGDLWSLVGIPSPENDFETNDAILLGYTVAWFLGEVAHLDSQHAIVAHFHQWLAGVALPLCR: 200
SecStr          :HHHHTTT  EEEEEESSTT  EEEEE STTTGGGHHHHHHHHHHHH     TT HHHHHHHHHHHHHHHHHHHHHHH SSEEEEEEEESTTTTTHHHHHH:    
ExpBur          :eebeeeebebbbbebeeeeebebbbbbbeebbeebeebbeebeeeeebeeeeebeebbebbbbbbbbbebbeebbeebeebbbbbbbbbbebbbbbbbbe:    

5vnc_D_1     201:KRRIDVVTIFTTHATLLGRYLCASGXXDFYNCLESVDVDHEAGRFGIYHRYCIERAAAHSADVFTTVSQITAFEAEHLLKRKPDGILPNGLNVIKFQAFH: 300
SecStr          :HTT SSEEEEEESS HHHHHHTS  -- TTTSSTTS HHHHHHHHT HHHHHHHHHHHHHSSEEEESSHHHHHHHHHHHT   SEE    B     SSTT:    
ExpBur          :eeeeebbbbbbbbbbbbbbeebeee--ebbeebeeeebeeebeeeeeebbbbbbebbbebbebbbbbbebbbebbebbbebebbbbbbbbeebeeeeeee:    

5vnc_D_1     301:EFQNLHALKKEKINDFVRGHFHGCFDFDLDNTLYFFIAGRYEYKNKGADMFIEALARLNYRLKVSGSKKTVVAFIVMPAKNNSFTVEALKGQAEVRALEN: 400
SecStr          :HHHHHHHHHHHHHHHHHHHHTTT   S GGGEEEEEEESS  TTTT HHHHHHHHHHHHHHHHHTT   EEEEEEE    EEEE HHHHHHHHHHHHHHH:    
ExpBur          :ebbebbeebbeebbbbbebbbbeeeebebeebbbbbbbbbeebebbbbebbbebbbebbebbeeeeeebbbbbbbbbebebeebbeebeebbebbeeeee:    
Contact         :                                      bb     b                             b                        

5vnc_D_1     401:TVHEVTTSIGKRIFDHAIRYPHNGLTTELPTDLGELLKSSDKVMLKRRILALRRPEGQLPPIVTHNMVDDANDLILNKIRQVQLFNSPSDRVKMIFHPEF: 500
SecStr          :HHHHHHHHHHHHHHHHHHHTTSTT  SSS  SGGGT  HHHHHHHHHHHHHH   TT    SBSEEETTTTT HHHHHHHHTT    TT SEEEEE  S :    
ExpBur          :beeebeeeeeeeeeebeeeeeeeeeeeeeeeeeeebeeeebeeebeeeeeebebeeeeebebbbbebeeeeebebbebbeebebebeeebbbbbbbbbee:    
Contact         :                                                                                                   b

5vnc_D_1     501:LNANNPILGLDYDEFVRGCHLGVFPSYYEPWGYTPAECTVMGVPSITTNVSGFGSYMEDLIETNQAKDYGIYIVDRRFKAPDESVEQLVDYMEEFVKKTR: 600
SecStr          :  TT SSS   HHHHHHH SEEE   SS SS HHHHHHHHTT  EEEETTSHHHHHHHHHS HHHHGGGTEEEE  SSS HHHHHHHHHHHHHHHHH  H:    
ExpBur          :beeebebbebeeebbbbbbbbbbbbbbbbbbbebbbebbbbbbbbbbbbbbbbbbbbeeebeeeebbeebbbbbbbbeeeeeebbebbbebbbebbebee:    
Contact         :b          b                b  bbb  b                                                               

5vnc_D_1     601:RQRINQRNRTERLSDLLDWKRMGLEYVKARQLALRRGYPDQFRELVGEELNDSNMDALA-----------------------------------------: 659
SecStr          :HHHHHHHHHHHHHTTTTBHHHHHHHHHHHHHHHHHHHSHHHHHHHHSS   SS STT -:    
ExpBur          :eebeebbeebbebbeebbbeebbeebeebbebbbbeebeeebbeeeeeeeeeeebeeb-:    


Input Residue Numbers for Focused Sites

ex) 2,15,123