Protein Model on 5vnc_B_1_G_1 (TEMPLATE: 5vnc )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[3D template]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query F)
1 a FB 1 (B) polymer(polypeptide(L)) [636 aa] Glycogen [starch] synthase isoform 2 :GYS2_YEAST
2 b G 1 (B) non-polymer(UDP) URIDINE-5'-DIPHOSPHATE 338A 339G 340R 346K 376V 500F 501L 512Y 529E 532G 533Y 534T 537E
FOCUSED TEMPLATE
MODEL[1] TEMPLATE:5vnc_B_1
5vnc_B_1       1:XXXXXXXXXXXXXXXXXXXXXSRDLQNHLLFETATEVANRVGGIYSVLKSKAPITVAQYKDHYHLIGPLNKATYQNEVDILDWKKPEAFSDEMRPVQHAL: 100
SecStr          :---------------------  EEEEEEEEEEETTSSS SSHHHHHHHHHHHHHHHHHGGGEEEEEE  TTTGGGTEE   SSSGGGS STTHHHHHHH:    
ExpBur          :---------------------ebebeebbbbbbbebbbbeeeebbebbebbbbebbeebeebbbbbbbbeeeeeeebbeeeebebeebbeeebebbbebb:    

5vnc_B_1     101:QTMESRGVHFVYGRWLIEGAPKVILFDLDSVRGYSNEWKGDLWSLVGIPSPENDFETNDAILLGYTVAWFLGEVAHLDSQHAIVAHFHQWLAGVALPLCR: 200
SecStr          :HHHHHTT  EEEEEESSTT  EEEEE STTTGGGHHHHHHHHHHHH     SS HHHHHHHHHHHHHHHHHHHHHHH  SEEEEEEEESTTTTTHHHHHH:    
ExpBur          :eebeeeebebbbbebebeeebbbbbbebeebeeebeebbeebeeeeebeeeeebeebbebbbbbbbbbebbeebbeebeebbbbbbbbbbbbbbbbbbbe:    

5vnc_B_1     201:KRRIDVVTIFTTHATLLGRYLCASXXFDFYNCLESVDVDHEAGRFGIYHRYCIERAAAHSADVFTTVSQITAFEAEHLLKRKPDGILPNGLNVIKFQAFH: 300
SecStr          :HTT SSEEEEEESS HHHHHHT  --  HHHHGGG  HHHHHHHTT HHHHHHHHHHHHHSSEEEESSHHHHHHHHHHHT   SEE    B     SSTT:    
ExpBur          :eeebebbbbbbbbbbbbbeebbee--eebbeebeebebeebbeeeebebbbbbbebbbebbbbbbbbbebbbbbbeebbebebbbbbbbbeebeeeeeee:    

5vnc_B_1     301:EFQNLHALKKEKINDFVRGHFHGCFDFDLDNTLYFFIAGRYEYKNKGADMFIEALARLNYRLKVSGSKKTVVAFIVMPAKNNSFTVEALKGQAEVRALEN: 400
SecStr          :HHHHHHHHHHHHHHHHHHHHTTT   S GGGEEEEEEESS  TTTTTHHHHHHHHHHHHHHHHHTT   EEEEEEE    EEEE HHHHHHHHHHHHHHH:    
ExpBur          :ebbebbeebbeebbbbbebbbbebeebebeebbbbbbbbbeeeebbbbebbbebbbebbebbeeeeeebbbbbbbbbebebeebbeebeebbebbeeeee:    
Contact         :                                     bbb     b                             b                        

5vnc_B_1     401:TVHEVTTSIGKRIFDHAIRYPHNGLTTELPTDLGELLKSSDKVMLKRRILALRRPEGQLPPIVTHNMVDDANDLILNKIRQVQLFNSPSDRVKMIFHPEF: 500
SecStr          :HHHHHHHHHHHHHHHHHHTSS TT  SSS  STTSS  HHHHHHHHHHHHTT   TT    SBSEEESSGGG HHHHHHHHTT    TT SEEEEEE S :    
ExpBur          :beeebeeeeeeeeeebeeebeeeebeeeeeeeeeebebeebeeeeeeeeeebebeeeeebebbbbebeeeeebebbebbeebebebeeebbbbbbbbbee:    
Contact         :                                                                                                   b

5vnc_B_1     501:LNANNPILGLDYDEFVRGCHLGVFPSYYEPWGYTPAECTVMGVPSITTNVSGFGSYMEDLIETNQAKDYGIYIVDRRFKAPDESVEQLVDYMEEFVKKTR: 600
SecStr          :  TT SSS   HHHHHHH SEEE   SSBSS HHHHHHHHTT  EEEETTBHHHHHHHTTS TTTGGGGTEEEE SSSS HHHHHHHHHHHHHHHHHS H:    
ExpBur          :beeebebbebeeebbbbbbbbbbbbbbbbbbbebbbebbbbbbbbbbbbbbbbbbbbeeebeeebbbeebbbbbebeeeeeeebbebbbebbbebbebee:    
Contact         :b          b                b  bbb  b                                                               

5vnc_B_1     601:RQRINQRNRTERLSDLLDWKRMGLEYVKARQLALRRGYPDQFRELVGEELNDSNMDALA-----------------------------------------: 659
SecStr          :HHHHHHHHHHHHHTTTTBHHHHHHHHHHHHHHHHHHH HHHHHHHHSS    S STT -:    
ExpBur          :eebeebbeebbebbeebbbeebbebbeebbebbbbeebeeebeeeeeeeeeeeebebb-:    


Input Residue Numbers for Focused Sites

ex) 2,15,123