#WARNING:no index is registered index "YP_009725304.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725304.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 7ed5 assembly_id=1

Protein Model on 7ed5 assembly_id=1 (TEMPLATE: 7ed5 assembly_id:1 )

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description b(query A)
1 a A 1 (A) polymer(polypeptide(L)) [926 aa] RNA-directed RNA polymerase :R1AB_SARS2 76S 79K 80R 82K 83V 84T 86A 87M 88Q 90M 91L 94M 95L 97K 98L 103L 104N 106I 107I 109N 110A 111R 112D 113G 114C 115V 116P 117L 118N 119I 120I 121P 122L 125A 127K 128L 129M 130V 131V 133P 137T 141T 149Y 154W 162A 183P 185I (identity: 100.0 %/100.0 %)
2 b A(queryA) B 1 (B) polymer(polypeptide(L)) [150 aa] Non-structural protein 8 :R1AB_SARS2
3 c C 1 (C) polymer(polypeptide(L)) [72 aa] Non-structural protein 7 :R1AB_SARS2 162A 163D 178P 180L 181A (identity: 100.0 %/100.0 %)
4 d D 1 (D) polymer(polypeptide(L)) [154 aa] Non-structural protein 8 :R1AB_SARS2
5 e E 1 (I) polymer(polyribonucleotide) RNA (5'-R(P*GP*CP*UP*AP*UP*GP*UP*GP*AP*GP*AP*UP*UP*AP*AP*GP*UP*UP*AP*U*(AT9))-3') 46K 50D (identity: 100.0 %/100.0 %)
6 f F 1 (J) polymer(polyribonucleotide) RNA (5'-R(P*CP*CP*CP*CP*AP*UP*AP*AP*CP*UP*UP*AP*AP*UP*CP*UP*CP*AP*CP*AP*UP*AP*GP*C)-3') 43N 46K (identity: 100.0 %/100.0 %)
7 g G 1 (A) non-polymer(ZN) ZINC ION
8 h H 1 (A) non-polymer(ZN) ZINC ION
9 i I 1 (A) non-polymer(MG) MAGNESIUM ION
10 j J 1 (A) non-polymer(AT9) [[(2R,3R,4R,5R)-5-(2-azanyl-6-oxidanylidene-1H-purin-9-yl)-4-fluoranyl-4-methyl-3-oxidanyl-oxolan-2-yl]methoxy-oxidanyl-phosphoryl] phosphono hydrogen phosphate
11 k K 1 (A) non-polymer(AT9) [[(2R,3R,4R,5R)-5-(2-azanyl-6-oxidanylidene-1H-purin-9-yl)-4-fluoranyl-4-methyl-3-oxidanyl-oxolan-2-yl]methoxy-oxidanyl-phosphoryl] phosphono hydrogen phosphate
12 l L 1 (A) non-polymer(MG) MAGNESIUM ION
13 m M 1 (A) non-polymer(MG) MAGNESIUM ION
14 n N 1 (I) non-polymer(AT9) [[(2R,3R,4R,5R)-5-(2-azanyl-6-oxidanylidene-1H-purin-9-yl)-4-fluoranyl-4-methyl-3-oxidanyl-oxolan-2-yl]methoxy-oxidanyl-phosphoryl] phosphono hydrogen phosphate
ALIGNMENTS
MODEL[2] Protein A "queryA" TEMPLATE:7ed5_B_1 identity=100.0%
queryA        43:NVAKSEFDRDAAMQRKLEKMADQAMTQMYKQARSEDKRAKVTSAMQTMLFTMLRKLDNDALNNIINNARDGCVPLNIIPLTTAAKLMVVIPDYNTYKNTC: 142
                :****************************************************************************************************:
7ed5_B_1      65:NVAKSEFDRDAAMQRKLEKMADQAMTQMYKQARSEDKRAKVTSAMQTMLFTMLRKLDNDALNNIINNARDGCVPLNIIPLTTAAKLMVVIPDYNTYKNTC: 164
SecStr          :   THHHHTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGG TTTSHHHHTTSSSS   GGGHHHHH SEEEEEESSHHHHHHH :    
ExpBur          :eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeebeebeeebeeeeeeeeebeeebeeebebebeebeebeeeb:    
Contact         :f  e   e                         a  aa aaa aaa aa  aa aa    aa aa aaaaaaaaaaaaaa  a aaaaa a   a   a 
Contact         :   f                                                                                                

queryA       143:DGTTFTYASALWEIQQVVDADSKIVQLSEISMDNSPNLAWPLIVTALRAN: 192
                :**************************************************:
7ed5_B_1     165:DGTTFTYASALWEIQQVVDADSKIVQLSEISMDNSPNLAWPLIVTALRAN: 214
SecStr          : SSEE SSSS EEEEEEE TT S B TTS STTTSTTS SSEEEEEEE  :    
ExpBur          :eeeebeeeeeebebeebbbeeeeebeeeebeeeebeebebebebbbeeee:    
Contact         :      a    a       ac              c cc a a                                                         
Contact         :                   c

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