[pdbjlvh2]Protein Model on 8rnd_A_1_D

Protein Model on 8rnd_A_1_D_1 (TEMPLATE: 8rnd )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(CATL1_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [219 aa]	Cathepsin S :CATS_HUMAN
2	b		D 1 (A)	non-polymer(PGE)	TRIETHYLENE GLYCOL	230K(G) 232E 272E(Q) 317D(N) 319R(G) 320N (identity: 33.3 %/57.5 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:8rnd_A_1 identity=57.5%

queryA       115:PRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQ-GNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKY: 213
                :* ******** ** ** ** ** ****** **** *   *** * *** *******    ** ***** *  ****  ** * **  **** *    * *:
8rnd_A_1       8:PDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQKCQY: 107
SecStr          : S EETTTTT      B  SSB HHHHHHHHHHHHHHHHHHS    B HHHHHHHS GGGT  TTB   HHHHHHHHHHHT EEBTTTS   SS      :    
ExpBur          :eeebbbeeeebbbebbebeebebbbbbbbbbbbbbbbeeeeeeeebbbbbbbbbbbeeebebebbeeeebbebbebbeeeebbbbeeebebeeeeeeeee:    

queryA       214:NPKYSVANDTGFVDIP-KQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYV: 312
                :  **  *        *   *  *  ***  ** **  ** * **  *  * * ** *      *********          *********   *  ** :
8rnd_A_1     108:DSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSC-TQNVNHGVLVVGYG----DLNGKEYWLVKNSWGHNFGEEGYI: 202
SecStr          : GGGEEE   EEEE  TT HHHHHHHHHHT  EEEEE   SHHHHT  SSEE  TT - S   EEEEEEEEE----EETTEEEEEEE SB TTSTBTTEE:    
ExpBur          :eeeeebbebeeeeebeeeebeebbebbbeebbbbbbbbbebeebeebeebbbebeeb-eeeeebbbbbbbbb----eeeeeebbbbbbbebeebeeebbb:    
Contact         :                 b b                                       b                                        

queryA       313:KMAKDRRNHCGIASAASYPTV: 333
                : **    *******  ***  :
8rnd_A_1     203:RMARNKGNHCGIASFPSYPEI: 223
SecStr          :EEE SSSSGGGTTTS EEEE :    
ExpBur          :bbbbeeebbbbbbbebbbbee:    
Contact         :    b bb

Protein Model on 8rnd_A_1_D_1 (TEMPLATE: 8rnd )

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