Protein Model on 8eqj assembly_id=1 (TEMPLATE: 8eqj assembly_id:1 )

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(AP3A_SARS) A 1 (A) polymer(polypeptide(L)) [192 aa] ORF3a protein :AP3A_SARS2
2 b B 1 (B) polymer(polypeptide(L)) [192 aa] ORF3a protein :AP3A_SARS2 47V(I) 48I(V) 50V 51A 54A 55V 57Q 58S 61K 62I 64A(T) 65L 66N(K) 85L 88V 92S 96L 105F 108L 112I(V) 115L 116Q 118I 119N 122R 144N 160Y 161N 162S 164T 165D(S) 166T(S) 168V 170T 173D 185Q 187G 188G 189Y 215E(Y) 216S 218Q 222D 223T 225I(V) 228A(V) 230F 232I (identity: 79.2 %/73.7 %)
3 c C 1 (A) non-polymer(PEE) 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine 118I 121C(V) 122R 126R 144N 206Y (identity: 83.3 %/73.7 %)
4 d D 1 (A) non-polymer(PEE) 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine 75K 76G 78Q(H) 79F 122R 123I 140L (identity: 85.7 %/73.7 %)
5 e E 1 (B) non-polymer(PEE) 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine 62I 63I 64A(T) (identity: 66.7 %/73.7 %)
6 f F 1 (B) non-polymer(PEE) 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:8eqj_A_1 identity=73.7%
queryA        40:SLPFGWLVIGVAFLAVFQSATKIIALNKRWQLALYKGFQFICNLLLLFVTIYSHLLLVAAGMEAQFLYLYALIYFLQCINACRIIMRCWLCWKCKSKNPL: 139
                :*******  *** ******* *** * ******* **  * ********* ********** ** ******* **** **  ***** ****** *****:
8eqj_A_1      40:SLPFGWLIVGVALLAVFQSASKIITLKKRWQLALSKGVHFVCNLLLLFVTVYSHLLLVAAGLEAPFLYLYALVYFLQSINFVRIIMRLWLCWKCRSKNPL: 139
SecStr          :   SHHHHHHHHHHHHHHHHHTT  S SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT  TTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSHHH:    
ExpBur          :eeeeeeeeebeeebeeeeeebeeeeeeeeebbeebeebeeebeebeeebbebbeebbeeeeeeeeeeeebeeeeeebeeeeeeeeebeebbeebebebbe:    
Contact         :       bb bb  bb bb  bbebbb        dd dd     b  b   b   b        b  b   b  bb bb cbd  c             
Contact         :                      e e                                                     c   c                 
Contact         :                                                                                  d                 

queryA       140:LYDANYFVCWHTHNYDYCIPYNSVTDTIVVTEGDGISTPKLKEDYQIGGYSEDRHSGVKDYVVVHGYFTEVYYQLESTQITTDTGIENATFFIFNKLV: 237
                :******* ****  ***********  ** * **         ******* *   ***** ** * ***  **** ***  **** *  **** ** *:
8eqj_A_1     140:LYDANYFLCWHTNCYDYCIPYNSVTSSIVITSGDXXXXXXXEHDYQIGGYTEKWESGVKDCVVLHSYFTSDYYQLYSTQLSTDTGVEHVTFFIYNKIV: 237
SecStr          :H   SEEEEEE SS EEEEEE S  SEEEEEEE -------  EEEETTEEEE  S   SEEEEE SS EEEEEEEEEE HHHH  TTEEEEEEEE  :    
ExpBur          :bbebeebbbbebeeebbbbbbeeeeeebebbbbe-------eeebebeeeebeeebeeeeebbbbbeeeeeebeeeeeeeeeeeeeeebbebebeeee:    
Contact         :d   b               bbb bbb b b  b           b bbb                c        bb b   bb b  b b b       
Contact         :    c                                                                                               


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