Protein Model on 8alk_B_1_A_1
(TEMPLATE: 
8alk
)Protein Model on 8alk_B_1_A_1
(TEMPLATE: 8alk
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(RAB7A_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [163 aa] | Ras-related protein Rab-1B :RAB1B_HUMAN | |
| 2 | b | A 1 (A) | polymer(polypeptide(L)) [447 aa] | Phosphocholine hydrolase Lem3 :LEM3_LEGPH | 14L(I) 68E 69R 70F 71Q(R) 72S(T) 73L(I) 74G(T) 75V(S) 76A(T) 77F(Y) 78Y 79R 102W 109Q(Y) 110A (identity: 43.8 %/37.1 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:8alk_B_1 identity=37.1% |
queryA 8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107
:* * ******* * ** * *********** **** * *** * * :
8alk_B_1 9:LFKLLLIGDSGVGKSCLLLRFADDTYTXXXXXXXXVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSTYYRGAHGIIVVYDVTDQESYANVKQWLQEID: 108
SecStr :EEEEEEESSTTSSHHHHHHHHHT -------- EEEEEEEETTEEEEEEEEE TTGGGT S S SEEEEEEETT HHHHHTHHHHHHHHH:
ExpBur :ebbbebbbbeebbbbebbbbbeeeeee--------eeeeeeebeeeeeebebbbebeeeeeeeeeeeeeeeeeeebbbbbbbbeeeebbeebeeebeebe:
Contact : b bbbbbbbbbbbb b
queryA 108:IQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIA: 170
: * ** *** ** * ** ***** * ****** * *:
8alk_B_1 109:RYAX----ENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMA: 167
SecStr :HH ----- EEEEEEE TT TTT S HHHHHHHHHHTT EEE BTTTTBTHHHHHHHHH:
ExpBur :eee-----eebeebbbbbebeeeeeeebeeeebeeebeeeebebebbbbeeeeebeebbeebb:
Contact : bb
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[assembly_id:1]
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