#WARNING:no index is registered index "YP_009725301.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725301.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 7gmf assembly_id=1

Protein Model on 7gmf assembly_id=1 (TEMPLATE: 7gmf assembly_id:1 )

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(queryA) A 1 (A) polymer(polypeptide(L)) [305 aa] 3C-like proteinase :R1AB_SARS2
2 b B 1 (B) polymer(polypeptide(L)) [297 aa] 3C-like proteinase :R1AB_SARS2 1S 2G 4R 5K 6M 7A 8F 9P 10S 11G 14E 118Y 121S 122P 123S 124G 125V 126Y 127Q 128C 137K 138G 139S 140F 141L 166E 170G 172H 283G 285A 286L 290E 298R 299Q 301S (identity: 100.0 %/100.0 %)
3 c C 1 (A) non-polymer(DMS) DIMETHYL SULFOXIDE 6M 298R 299Q (identity: 100.0 %/100.0 %)
4 d D 1 (A) non-polymer(DMS) DIMETHYL SULFOXIDE 14E 15G 16C 17M 70A 71G (identity: 100.0 %/100.0 %)
5 e E 1 (A) non-polymer(DMS) DIMETHYL SULFOXIDE 166E 168P 188R 189Q 190T 192Q (identity: 100.0 %/100.0 %)
6 f F 1 (A) non-polymer(DMS) DIMETHYL SULFOXIDE 6M 8F 127Q 295D 298R (identity: 100.0 %/100.0 %)
7 g G 1 (A) non-polymer(DMS) DIMETHYL SULFOXIDE 17M 19Q 69Q 70A 71G 119N 120G 121S (identity: 100.0 %/100.0 %)
8 h H 1 (A) non-polymer(DMS) DIMETHYL SULFOXIDE 105R 180N (identity: 100.0 %/100.0 %)
9 i I 1 (A) non-polymer(CL) CHLORIDE ION 106I 107Q 110Q (identity: 100.0 %/100.0 %)
10 j J 1 (A) non-polymer(RJF) (4S)-6-chloro-2-[2-(methylamino)-2-oxoethyl]-N-(5-methylisoquinolin-4-yl)-1-oxo-1,2,3,4-tetrahydroisoquinoline-4-carboxamide 41H 49M 140F 141L 142N 144S 145C 163H 164H 165M 166E 187D 188R 189Q (identity: 100.0 %/100.0 %)
11 k K 1 (B) non-polymer(DMS) DIMETHYL SULFOXIDE 123S (identity: 100.0 %/100.0 %)
12 l L 1 (B) non-polymer(DMS) DIMETHYL SULFOXIDE 137K (identity: 100.0 %/100.0 %)
13 m M 1 (B) non-polymer(DMS) DIMETHYL SULFOXIDE 5K 7A 125V 127Q (identity: 100.0 %/100.0 %)
14 n N 1 (B) non-polymer(DMS) DIMETHYL SULFOXIDE
15 o O 1 (B) non-polymer(RJF) (4S)-6-chloro-2-[2-(methylamino)-2-oxoethyl]-N-(5-methylisoquinolin-4-yl)-1-oxo-1,2,3,4-tetrahydroisoquinoline-4-carboxamide 1S (identity: 100.0 %/100.0 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7gmf_A_1 identity=100.0%
queryA         1:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPK: 100
                :****************************************************************************************************:
7gmf_A_1       1:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPK: 100
SecStr          :          HHHHTTEEEEEETTEEEEEEEETTEEEEEGGGG  TTTTSS  HHHHHHT  GGGEEEEETTEEE EEEEEEETTEEEEEESS  TT  S:    
ExpBur          :eebeeeebebeebeebbbbbbbeeeebbbbbbeebbbbbbbbbbeeeebeebebeebbeeeeeeebebebeeeebebeeeeeeebbbebebeeebeeebe:    
Contact         :bb bbbbbbbb  bddd g                     j       j                   gdd                             
Contact         :o   mcmf     d  g                                                    gg                             
Contact         :     f                                                                                              

queryA       101:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTI: 200
                :****************************************************************************************************:
7gmf_A_1     101:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTI: 200
SecStr          :EEE    TT EEEEEEEETTEEEEEEEEE  TTS B     TT TT EEEEEETTEEEEEEEEEEE TTS EEEE TTS BSSS  SS SS       B :    
ExpBur          :eeeeebeebebbbbbbbeebeeeeeebbbbbbbebbeeebeeebbbbbbbbbeeebbbbbbbbbbebeeebbbbbbbebebbeebebeeeebeeeeebeb:    
Contact         :    hii  i       bggbbbbbbbb        bbbbbj jj                 jjjb e b b       h      jeee e        
Contact         :                    g k m f         l  jj                        e                     jj           
Contact         :                          m                                      j                                  

queryA       201:TVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQC: 300
                :****************************************************************************************************:
7gmf_A_1     201:TVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQC: 300
SecStr          :HHHHHHHHHHHHHTT  TT  S    HHHHHHHHHTTTB    HHHHHHTHHHHHHHT  HHHHHHHHHHHHHH  TT  BTTBSS   S  HHHHHHHS:    
ExpBur          :bbbbbbbbbbbbbeeeeebeeeeebeeeebbeebeeeebeebeeeebeebeebeeebebebeebbbbbeebbeeebeeeebeebeebebbbbbebbeeeb:    
Contact         :                                                                                  b bb   b    f  bb 
Contact         :                                                                                                 cc 
Contact         :                                                                                                 f  

queryA       301:SGVTF: 305
                :*****:
7gmf_A_1     301:SGVTF: 305
SecStr          : SS  :    
ExpBur          :eeeee:    
Contact         :b                                                                                                   


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