Protein Model on 7ghz assembly_id=1
(TEMPLATE: 
7ghz
assembly_id:1
)Protein Model on 7ghz assembly_id=1
(TEMPLATE: 7ghz
assembly_id:1
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| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(queryA) | A 1 (A) | polymer(polypeptide(L)) [306 aa] | 3C-like proteinase :R1AB_SARS2 | |
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [305 aa] | 3C-like proteinase :R1AB_SARS2 | 1S 2G 4R 5K 6M 7A 8F 9P 10S 11G 14E 118Y 121S 122P 123S 124G 125V 126Y 127Q 137K 138G 139S 140F 141L 166E 170G 172H 280T 283G 285A 286L 290E 298R 299Q 301S (identity: 100.0 %/100.0 %) | |
| 3 | c | C 1 (A) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 6M 298R 299Q (identity: 100.0 %/100.0 %) | |
| 4 | d | D 1 (A) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 15G 17M 70A 71G (identity: 100.0 %/100.0 %) | |
| 5 | e | E 1 (A) | non-polymer(PJX) | (4R)-6-chloro-N-(isoquinolin-4-yl)-1-methyl-1,2,3,4-tetrahydroquinoline-4-carboxamide | 41H 49M 140F 141L 142N 144S 145C 163H 164H 165M 166E 187D 188R 189Q (identity: 100.0 %/100.0 %) | |
| 6 | f | F 1 (A) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 6M 7A 8F 127Q 295D 298R (identity: 100.0 %/100.0 %) | |
| 7 | g | G 1 (A) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 22C 23G 24T 25T 43I 44C 45T 61K (identity: 100.0 %/100.0 %) | |
| 8 | h | H 1 (A) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 51N 52P 53N (identity: 100.0 %/100.0 %) | |
| 9 | i | I 1 (A) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 40R 84N (identity: 100.0 %/100.0 %) | |
| 10 | j | J 1 (A) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 17M 19Q 69Q 70A 71G 119N 120G 121S (identity: 100.0 %/100.0 %) | |
| 11 | k | K 1 (A) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 166E (identity: 100.0 %/100.0 %) | |
| 12 | l | L 1 (A) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 271L 276M 285A 286L 287L (identity: 100.0 %/100.0 %) | |
| 13 | m | M 1 (A) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 235M 236K 238N (identity: 100.0 %/100.0 %) | |
| 14 | n | N 1 (A) | non-polymer(CL) | CHLORIDE ION | 106I 107Q 110Q (identity: 100.0 %/100.0 %) | |
| 15 | o | O 1 (B) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 123S (identity: 100.0 %/100.0 %) | |
| 16 | p | P 1 (B) | non-polymer(DMS) | DIMETHYL SULFOXIDE | ||
| 17 | q | Q 1 (B) | non-polymer(PJX) | (4R)-6-chloro-N-(isoquinolin-4-yl)-1-methyl-1,2,3,4-tetrahydroquinoline-4-carboxamide | ||
| 18 | r | R 1 (B) | non-polymer(DMS) | DIMETHYL SULFOXIDE | ||
| 19 | s | S 1 (B) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 5K 6M 7A 125V 127Q (identity: 100.0 %/100.0 %) | |
| 20 | t | T 1 (B) | non-polymer(DMS) | DIMETHYL SULFOXIDE | ||
| 21 | u | U 1 (B) | non-polymer(DMS) | DIMETHYL SULFOXIDE | ||
| 22 | v | V 1 (B) | non-polymer(DMS) | DIMETHYL SULFOXIDE | ||
| 23 | w | W 1 (B) | non-polymer(DMS) | DIMETHYL SULFOXIDE | ||
| 24 | x | X 1 (B) | non-polymer(DMS) | DIMETHYL SULFOXIDE | ||
| 25 | y | Y 1 (B) | non-polymer(DMS) | DIMETHYL SULFOXIDE | 5K 127Q (identity: 100.0 %/100.0 %) | |
| 26 | z | Z 1 (B) | non-polymer(CL) | CHLORIDE ION | ||
| 27 | 1 | AA 1 (B) | non-polymer(CL) | CHLORIDE ION | ||
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:7ghz_A_1 identity=100.0% |
queryA 1:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPK: 100
:****************************************************************************************************:
7ghz_A_1 1:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPK: 100
SecStr : HHHHTTEEEEEETTEEEEEEEETTEEEEEGGGG TTTTSS HHHHHHT GGGEEEEETTEEE EEEEEEETTEEEEEESS TT S:
ExpBur :eebeeeebebeebeebbbbbbbeeeebbbbbbeebbbbbbbbbbeeeebeebebeebbeeeeeeebebebeeeebebeeeeeeebbbebebeeebeeebe:
Contact :bb bbbbbbbb bd d j gggg ie ggg e hhh g jdd i
Contact : scff j jj
Contact : yfs
Contact : s
queryA 101:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTI: 200
:****************************************************************************************************:
7ghz_A_1 101:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTI: 200
SecStr :EEE TT EEEEEEEETTEEEEEEEEE TTS B TT TT EEEEEETTEEEEEEEEEEE TTS EEEE TTS BSSS SSSS B :
ExpBur :eeeeebeebebbbbbbbeebeeeeeebbbbbbbebbeeebeeebbbbbbbbbeeebbbbbbbbbbebeeebbbbbbbebebbeebebeeeebeeeeebeb:
Contact : nn n bjjbbbbbbb bbbbbe ee eeeb b b eee
Contact : j o s f ee e
Contact : s k
Contact : y
queryA 201:TVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQC: 300
:****************************************************************************************************:
7ghz_A_1 201:TVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQC: 300
SecStr :HHHHHHHHHHHHHTT TT S HHHHHHHHHHTTB HHHHHHTHHHHHHHT HHHHHHHHHHHHHH TT BTTBSS S HHHHHHHS:
ExpBur :bbbbbbbbbbbbbbeeeebbeeeebeeeebbeebeeeebeebeeeebeebeebbeebebebeebbbbbeebbeeebeeeebeebeebebbbbbebbeeeb:
Contact : mm m l l b b bbl b f bb
Contact : ll cc
Contact : f
queryA 301:SGVTFQ: 306
:******:
7ghz_A_1 301:SGVTFQ: 306
SecStr : SS :
ExpBur :eeebee:
Contact :b
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