CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(RAB7A_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [178 aa] | Ras-related protein Rab-8A :RAB8A_HUMAN | |
2 | b | A 1 (A) | polymer(polypeptide(L)) [284 aa] | SPI-1 type III secretion system effector SopD :A0A5K1V7S2_SALTM | 8L 38K(I) 43A(I) 45F 46L(K) 47T(I) 58T(K) 60Q 62W 68E 74G(T) 75V(T) 76A 79R 82D(M) (identity: 46.7 %/41.9 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7bwt_B_1 identity=41.9% |
queryA 8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107 :* * ******** * *** ** * *********** * **** ** * * * * : 7bwt_B_1 7:LFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIE: 106 SecStr :EEEEEEEE TTSSHHHHHHHHHH SSS SS EEEEEEEETTEEEEEEEE TTTS SS HHHHTT EEEEEEETT HHHHHTHHHHHHHHH: ExpBur :ebebbbbbbeebbbeebbbbbbeeeeeeeeeeeeeeeebeeebebeeeebebbbbbbbeeeeeeebeeebbeebebbbbbbbbeeeebbeebeebbebbe: Contact :b b b bbb b b b b bbb b b queryA 108:IQASPRDPENFPFVVLGNKIDL-ENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARN: 172 : ** * * **** * *** * * ***** **** ** * ** : 7bwt_B_1 107:EHASA-DVEK---MILGNKCDVNDKRQVSKERGEKLALDY-GIKFMETSAKANINVENAFFTLARD: 167 SecStr :HHS T-T EE---EEEEE TT TT S HHHHHHHHHHH-T EEEE BTTTTBSHHHHHHHHHHH: ExpBur :eebee-ebee---bbbbbeeebeeeeebeeeebeebbeee-ebebebbbbeeeeebeebbebbbeb: |