#WARNING:no index is registered index "YP_009725301.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725301.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
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MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | A 1 (A) | polymer(polypeptide(L)) [306 aa] | 3C-like proteinase :R1AB_SARS2 | |
2 | b | B 1 (B) | polymer(polypeptide(L)) [301 aa] | 3C-like proteinase :R1AB_SARS2 | 1S 2G 4R 5K 6M 7A 8F 9P 10S 11G 14E 122P 123S 124G 125V 126Y 127Q 137K 138G 139S 140F 141L 166E 170G 172H 283G 285A 286L 290E 298R 299Q 300C 301S (identity: 100.0 %/100.0 %) | |
3 | c | C 1 (A) | non-polymer(EDO) | 1,2-ETHANEDIOL | 14E 15G 16C 17M 70A 71G (identity: 100.0 %/100.0 %) | |
4 | d | D 1 (A) | non-polymer(EDO) | 1,2-ETHANEDIOL | 17M 18V 19Q 69Q 70A 71G 119N 120G (identity: 100.0 %/100.0 %) | |
5 | e | E 1 (A) | non-polymer(EDO) | 1,2-ETHANEDIOL | 11G 14E 15G 97K (identity: 100.0 %/100.0 %) | |
6 | f | F 1 (A) | non-polymer(EDO) | 1,2-ETHANEDIOL | 11G 12K (identity: 100.0 %/100.0 %) | |
7 | g | G 1 (A) | non-polymer(EDO) | 1,2-ETHANEDIOL | 40R 84N 85C (identity: 100.0 %/100.0 %) | |
8 | h | H 1 (A) | non-polymer(EDO) | 1,2-ETHANEDIOL | 133N 184P 185F 194A 195G (identity: 100.0 %/100.0 %) | |
9 | i | I 1 (A) | non-polymer(EDO) | 1,2-ETHANEDIOL | 140F 141L 142N 143G 144S 145C 163H 166E (identity: 100.0 %/100.0 %) | |
10 | j | J 1 (A) | non-polymer(EDO) | 1,2-ETHANEDIOL | 51N 52P 53N (identity: 100.0 %/100.0 %) | |
11 | k | K 1 (A) | non-polymer(EDO) | 1,2-ETHANEDIOL | 122P 123S (identity: 100.0 %/100.0 %) | |
12 | l | L 1 (A) | non-polymer(CL) | CHLORIDE ION | 106I 107Q 110Q (identity: 100.0 %/100.0 %) | |
13 | m | M 1 (B) | non-polymer(EDO) | 1,2-ETHANEDIOL | 5K 7A 125V 126Y 127Q (identity: 100.0 %/100.0 %) | |
14 | n | N 1 (B) | non-polymer(EDO) | 1,2-ETHANEDIOL | ||
15 | o | O 1 (B) | non-polymer(EDO) | 1,2-ETHANEDIOL | ||
16 | p | P 1 (B) | non-polymer(EDO) | 1,2-ETHANEDIOL | ||
17 | q | Q 1 (B) | non-polymer(EDO) | 1,2-ETHANEDIOL | ||
18 | r | R 1 (B) | non-polymer(NA) | SODIUM ION |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7bb2_A_1 identity=100.0% |
queryA 1:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPK: 100 :****************************************************************************************************: 7bb2_A_1 1:SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPK: 100 SecStr : HHHHTTEEEEEETTEEEEEEEETTEEEEEGGGG SGGGSS HHHHHHT GGG EEEETTEEE EEEEEEETTEEEEEESS TT S: ExpBur :eebeeeebebeebeebbbbbbbeeeebbbbbbeeebbbbebbbbeeebbeebebeebbeeeeeeebebebeeeebebebeeeeebbbebebeeebeeebe: Contact :bb bbbbbbbbf bcccdd g jjj dcc gg e Contact : m m e ce d dd Contact : f e queryA 101:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTI: 200 :****************************************************************************************************: 7bb2_A_1 101:YKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTI: 200 SecStr :EEE TT EEEEEEEETTEEEEEEEEE TTS B TT TT EEEE GGG EEEEEEEEEE TTS EEEE TTS BSTT SS S B : ExpBur :eeeeebeebebbbbbbbbebeeeeeebbbbbbbebbeeebeeebbbbbbbbbeeebbbbbbbbbbebeeebbbbbbbebebbeebebeeeebebeeeeeb: Contact : ll l dd bbbbbb h bbbbbiiii i b b b hh hh Contact : kk mmm ii i queryA 201:TVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQC: 300 :****************************************************************************************************: 7bb2_A_1 201:TVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQC: 300 SecStr :HHHHHHHHHHHHHTT TT S HHHHHHHHGGGTB HHHHHHTHHHHHHHT HHHHHHHHHHHHHH TT BTTBSS S HHHHHHHS: ExpBur :bbbbbbbbbbbbbbeeeebbeeeebeeeebbeebeeeebeebeeeebeebeebbeebebebeebbbbbbebbeeebeeeebeebeebebbbbbebbeeeb: Contact : b bb b bbb queryA 301:SGVTFQ: 306 :******: 7bb2_A_1 301:SGVTFQ: 306 SecStr : SS : ExpBur :eeebee: Contact :b |