[pdbjlvh2]Protein Model on 6yyo_A_1_PA

Protein Model on 6yyo_A_1_PA_1 (TEMPLATE: 6yyo )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(CATL1_HUMAN)	A 1 (AAA)	polymer(polypeptide(L)) [220 aa]	Cathepsin S :CATS_HUMAN
2	b		PA 1 (BBB)	non-polymer(Q1K)	6-(4-methylsulfonylpiperazin-1-yl)-[1,2,4]triazolo[4,3-b]pyridazine	182L(F) 227D(E) (identity: 0.0 %/57.5 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:6yyo_A_1 identity=57.5%

queryA       115:PRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQ-GNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKY: 213
                :* ******** ** ** ** ** ****** **** *   *** * *** *******    ** ***** *  ****  ** * **  **** *    * *:
6yyo_A_1       4:PDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQKCQY: 103
SecStr          : S EEGGGGT      B TTS  HHHHHHHHHHHHHHHHHHS    B HHHHHHHS GGGT  GGG   HHHHHHHHHHHT EEBTTTS   SS      :    
ExpBur          :eeebbbeeeebbbebbebeebebbbbbbbbbbbbbbbeeeeeeeebbbbbbbbbbbeeeeebebbeeeebbebbebbeeeebbbbeeebebeeeeeeeeb:    
Contact         :                                                                    b                               

queryA       214:NPKYSVANDTGFVDIP-KQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYV: 312
                :  **  *        *   *  *  ***  ** **  ** * **  *  * * ** *      *********          *********   *  ** :
6yyo_A_1     104:DSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSC-TQNVNHGVLVVGYG----DLNGKEYWLVKNSWGHNFGEEGYI: 198
SecStr          : GGGEEE   EEEE  TT HHHHHHHHHHT  EEEEE   SHHHHT  SSEE  TT - S   EEEEEEEEE----EETTEEEEEEE SB TTSTBTTEE:    
ExpBur          :eeeeeebebeeeeebeeeebebbeebbbeebbbbbbbbbebeebeebeebbbebeeb-eeeeebbbbbbbbb----eeeeeebbbbbbbebeebbeebbb:    
Contact         :             b                                                                                      

queryA       313:KMAKDRRNHCGIASAASYPTV: 333
                : **    *******  ***  :
6yyo_A_1     199:RMARNKGNHCGIASFPSYPEI: 219
SecStr          :EEE SSSSGGGTTTS EEEE :    
ExpBur          :bbbbeeebbbbbbbebbbbeb:

Protein Model on 6yyo_A_1_PA_1 (TEMPLATE: 6yyo )

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