CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(RAB7A_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [173 aa] | Ras-related protein Rab-8A :A0A1U7REJ8_MESAU | |
2 | b | B 1 (B) | polymer(polypeptide(L)) [339 aa] | Multifunctional virulence effector protein DrrA :DRRA_LEGPN | 26N(F) 30N(E) 32K(A) 33F 34S(N) 35N(S) 36Q(T) 38K(I) 39A(S) 40T 41I 42G 43A(I) 44D 45F 46L(K) 47T(I) 58T(K) 60Q 69R 70F 73L(I) 77F(Y) (identity: 39.1 %/41.2 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:6yx5_A_1 identity=41.2% |
queryA 3:SRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSW: 102 :* * * ******** * *** ** * *********** * **** ** * * * *: 6yx5_A_1 1:SHMDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNW: 100 SecStr : SEEEEEEEE TTSSHHHHHHHHHHS S SEEEEEEEEEETTEEEEEEEEEE SGGGHHHHHTTTTT SEEEEEEETT HHHHHTHHHH: ExpBur :eeeeeebebbbbbbeebbbebbbebbeeeeeeeeeeebebeeeeeeebebeeeebebebbbbbbeeebbeebeeebeebebbbbbbbbbeeebbeebeeb: Contact : b b bbbbb bbbbbbbbbb b b bb b b queryA 103:RDEFLIQASPRDPENFPFVVLGNKIDL-ENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARN: 172 : ** * * **** * *** * * ***** **** ** * ** : 6yx5_A_1 101:IRNIEEHASA-DVEK---MILGNKCDVNDKRQVSKERGEKLALDY-GIKFMETSAKANINVENAFFTLARD: 166 SecStr :HHHHHHHS T-T EE---EEEEE TT GGG S HHHHHHHHHHT-T EEEE BTTTTBSHHHHHHHHHHH: ExpBur :beebeeebee-ebbe---bbbbbebeeeeeeebeeeebeebbeee-ebebbbbbbeeeeebeebbbbbbeb: |