Protein Model on 6o62 assembly_id=1
(TEMPLATE: 
6o62
assembly_id:1
)Protein Model on 6o62 assembly_id=1
(TEMPLATE: 6o62
assembly_id:1
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| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(RAB7A_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [169 aa] | Ras-related protein SEC4 :SEC4_CANAL | |
| 2 | b | A 2 (A) | polymer(polypeptide(L)) [169 aa] | Ras-related protein SEC4 :SEC4_CANAL | 7V(M) 8L(I) 42G 43A(I) 44D 45F 47T(I) 58T(K) 60Q 62W 69R 71Q(R) 72S(T) 73L(I) 74G(T) 75V(T) 76A 77F(Y) 79R 80G 82D(M) 110A(H) 112P(N) 180V 181E (identity: 44.0 %/38.7 %) | |
| 3 | c | B 1 (A) | non-polymer(GDP) | GUANOSINE-5'-DIPHOSPHATE | 16D 17S 18G 19V 20G 21K 22T(S) 23S(C) 34S(N) 125N 126K 128D 155S 156A 157K (identity: 80.0 %/38.7 %) | |
| 4 | d | B 2 (A) | non-polymer(GDP) | GUANOSINE-5'-DIPHOSPHATE | ||
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:6o62_A_1 identity=38.7% |
queryA 7:VLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEF: 106
: * ******* * * ** * ** * ********* * **** ** *** * * :
6o62_A_1 13:MIMKLLLVGDSGVGKSCLLLRFVEDKFNXXXXXXXGIDFKIRTIESKGKRIKLQVWDTAGQERFRTITTAYYRGAMGIVLIYDVTDSRSFENVENWF-QT: 111
SecStr :EEEEEEEE TTSSHHHHHHHHHT ------- EEEEEEEEETTEEEEEEEEE SSS TT HHHHSS SEEEEEEETT HHHHHTHHHHH-HH:
ExpBur :bebbbbbbbeeebbbebbbebbeeeeee-------eeeeeeeebebeeeebebebbbbbeebeeeeeeeeebeebebbbbbbbbbeeebbeebeebe-ee:
Contact :bb cccccccc c bbbb b b b b b bbbbbbb bb b
queryA 107:LIQASPRDPENFPFVVLGNKIDLE-NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVE: 181
: * * * *** * * **** * * * * * *** ** * * ** **:
6o62_A_1 112:VTQHANEDAQIF---LVGNKCDDEVNRQVSKEQGQELA-AKLNVPFLEASAKSNENVDSIFYELA--SIIQEKHVE: 181
SecStr :HHHHS TT EEE---EEEE TT TT S HHHHHHHH-HHHT EEE BTTTTBTHHHHHHHHH--HHHHHH :
ExpBur :beeebeeebbbb---bbbbebeeeeeeebeeeebeebb-eebebebbbbbbeeeeebeebbeebb--eebbeeeee:
Contact : b b cc c ccc bb
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