[pdbjlvh2]Protein Model on 6l6o_A_1_C

Protein Model on 6l6o_A_1_C_1 (TEMPLATE: 6l6o )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(RAB7A_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [165 aa]	Rab5a :A0A109NYM0_LEIDO
2	b		C 1 (A)	non-polymer(GOL)	GLYCEROL	128D 129L 130E(G) 131N(S) (identity: 50.0 %/40.1 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:6l6o_A_1 identity=40.1%

queryA        10:KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQ: 109
                :*   ** ** ** *         *      **** ** * ** * *     ****** *** **    ****     * * *     *    *  *    :
6l6o_A_1      17:KIVMLGESGAGKSSIALRFTRNEFLANQETTIGAAFLSKTVMIDGRALKYEIWDTAGLERFRSLAPIYYRGASGALVVYDITNSESLKKAQTWIKELRAN: 116
SecStr          :EEEEEESTTSSHHHHHHHHHHS   SS  TTTS SEEEEEEE SSSEEEEEEE  TTGGGGT   HHHHTT SEEEEEEETT HHHHHHHHHHHHHHHHH:    
ExpBur          :bbbbbbbeebbbeebbbbbbeeeeeeeeeeeeeeeebeeebeeeeeebebebebbebebeeeebeeebbeebebbbbbbbbbeeebbeebeebbeebeee:    

queryA       110:ASPRDPENFPFVVLGNKIDLEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIA: 170
                :* *        *  *** **   ***     *            * ***   **** *   *:
6l6o_A_1     117:ADP----SLIIVLVGNKKDLGSLRQVSFEDGQRLAAEEQLAAFYEASAKDNNNVEQVFLDLA: 174
SecStr          :S T----T EEEEEEE TT GGG  S HHHHHHHHHHTT SEEEE BTTTTBSHHHHHHHHH:    
ExpBur          :bee----ebbbbbbbbeeeeeeeeebeeeebeebbeebebeebbbbbbeeeeebeebbeebb:    
Contact         :                  bbbbb

Protein Model on 6l6o_A_1_C_1 (TEMPLATE: 6l6o )

Input Residue Numbers for Focused Sites