Protein Model on 6djl_A_1_C_1
(TEMPLATE: 
6djl
)Protein Model on 6djl_A_1_C_1
(TEMPLATE: 6djl
)| CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(RAB7A_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [176 aa] | Ras-related protein Rab-11A :RB11A_HUMAN | |
| 2 | b | C 1 (C) | polymer(polypeptide(L)) [224 aa] | SH3 domain-binding protein 5 :3BP5_HUMAN | 8L 10K 32K(E) 33F 35N(L) 36Q(E) 39A(S) 40T 41I 45F 58T(K) 60Q 62W 70F(Y) 72S(A) 73L(I) 76A 79R (identity: 55.6 %/40.8 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:6djl_A_1 identity=40.8% |
queryA 8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107
:* ** ******* * * * *** * * ** ******* ** * **** ** * * * * :
6djl_A_1 14:LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGLERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELR: 113
SecStr :EEEEEEEE GGG HHHHHTTTS BSSSS STTTTS EEEEEEEEETTEEEEEEEEE TTS TTHHHHHTT EEEEEE TT HHHHHHHHHHHHHHH:
ExpBur :ebbbbbbbeeebebeebbeeebeeeeeeebeeeebbbebbbebebeeeebbbebebbbeeeeebeebeebbeebebbbbbbbeeeeebbeebeebbebbe:
Contact :b b bb bb bbb b b b b b bb b b
queryA 108:IQASPRDPENFPFVVLGNKIDLEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTI: 169
: * * ** * * * * * * ** **** *** *****:
6djl_A_1 114:DHADS----NIVIMLVGNXXXLRHLRAVPTDEARAFA-EKNGLSFIETSALDSTNVEAAFQTI: 171
SecStr :HHS T----T EEEEEE --- S SS HHHHHHHH-HHTT EEEE SSSTHHHHHHHHHH:
ExpBur :eebee----ebbbbbbbb---eeeeeebeeeebeebb-eeeebebeebeeeeeeebeebbeeb:
|
[assembly_id:1]
[help]