Protein Model on 4pvz_B_1_D_1
(TEMPLATE: 
4pvz
)Protein Model on 4pvz_B_1_D_1
(TEMPLATE: 4pvz
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(IMA1_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [422 aa] | Importin subunit alpha :IMA1_YEAST | |
| 2 | b | D 1 (D) | polymer(polypeptide(L)) [19 aa] | Inner nuclear membrane protein HEH2 :HEH2_YEAST | 102K(Q) 104L 105S 106R 107E 110P 142W 146N 148A 149S 150G 151T 155T 181Q 184W 188N 191G 192D 231W 235N 238R 240K 273W 280D 281G 315R 319N 321V 322T 323G 328T 353K 354E 357W 360S 361N 364A 395K 396E 399W 403N (identity: 97.6 %/49.6 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:4pvz_B_1 identity=49.6% |
queryA 81:IVKGINSSNVENQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGRTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISE: 180
: ** ** ** * **** **** * ** * * * * * ************ *** *** * * ** ** *:
4pvz_B_1 5:MTQQLNSDDMQEQLSATVKFRQILSREHRPPIDVVIQAGVVPRLVEFMRENQPEMLQLEAAWALTNIASGTSAQTKVVVDADAVPLFIQLLYTGSVEVKE: 104
SecStr :HHHHHT S HHHHHHHHHHHHHHTSSSS HHHHHHTT HHHHHHTTSTTS HHHHHHHHHHHHHHTTS HHHHHHHHHTTHHHHHHHHHHHS HHHHH:
ExpBur :bbebbebeeeeebbebbbebbeebeeeeeeebeebbeeebbebbbebbeeeeeeebbbbbbebbbbbbeeeeebbeebbeeebbebbbebbeebeeebeb:
Contact : b bbbb b b b bbbb b
queryA 181:QAVWALGNIAGDGSVFRDLVIKYGAVDPLLALLAVPDMSSLACGYLRNLTWTLSNLCRNKNPAPPIDAVEQILPTLVRLLHHDDPEVLADTCWAISYLTD: 280
:** ***** *** ** * * * * * * * ********* * * * * * **** * * * * * ******* *:
4pvz_B_1 105:QAIWALGNVAGDSTDYRDYVLQCNAMEPILGLF-----NSNKPSLIRTATWTLSNLCRGKKPQPDWSVVSQALPTLAKLIYSMDTETLVDACWAISYLSD: 199
SecStr :HHHHHHHHHHTT HHHHHHHHHTT HHHHHHGG-----G HHHHHHHHHHHHHHH SS HHHHGGGHHHHHHHTT S HHHHHHHHHHHHHHTS:
ExpBur :bbbebbbbbbeeebebbbebbeeebbebbbebb-----eeeeeebbebbbebbbbbbeeeeeebeeebbeebbebbbebbeeeeeebbbebbebbbebbe:
Contact :b b b bb b b b b b b
queryA 281:GPNERIGMVVKTGVVPQLVKLLGASELPIVTPALRAIGNIVTGTDEQTQVVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVP: 380
:** * * * ** ** ****** ****** * ****** ** * ** ** ** *** ** ****** *** * * *:
4pvz_B_1 200:GPQEAIQAVIDVRIPKRLVELLSHESTLVQTPALRAVGNIVTGNDLQTQVVINAGVLPALRLLLSSPKENIKKEACWTISNITAGNTEQIQAVIDANLIP: 299
SecStr :SSHHHHHHHHHTTHHHHHHHGGG S HHHHHHHHHHHHHHTTS HHHHHHHHHTTHHHHHHHHTT SSHHHHHHHHHHHHHHTTS HHHHHHHHHTT HH:
ExpBur :eeeebbeebbebebbebbbebbebebeebbbbbbebbbbbbeeeeebbeebbeeebbebbeebbebeeeebbebbbebbbebbeeebebbeebbeeebbe:
Contact :b b b bbb b bb b bb b
queryA 381:FLVSVLSKADFKTQKEAVWAVTNYTSGGTV--EQIVYLVHCGIIEPLMNLLTAKDTKIILVILDAISNIFQAAEKLGETEKLSI-----MIEECGGLDKI: 473
: ** * * ** *** ** * *** * *** * * ** ** * ** * *** ** * * * * ** ** **:
4pvz_B_1 300:PLVKLLEVAEYKTKKEACWAISNASSGGLQRPDIIRYLVSQGCIKPLCDLLEIADNRIIEVTLDALENILKMGEADKEARGLNINENADFIEKAGGMEKI: 399
SecStr :HHHHHHHHS HHHHHHHHHHHHHHHGGGTT THHHHHHHHTT HHHHHHHHHHS HHHHHHHHHHHHHHHHHHHHHHHTT SS HHHHHHHHTTHHHHH:
ExpBur :ebbebbeebeeebbebbbebbbbbbebbeeeeebbeebbeeebbebbbebbeebeeebbbbbbebbbbbbebbeebbeeeeeeebebbeebeebebbebb:
Contact : bb b b
queryA 474:EALQNHENESVYKASLSLIEKYF: 496
: * ** * ** **:
4pvz_B_1 400:FNCQQNENDKIYEKAYKIIETYF: 422
SecStr :HHGGG S HHHHHHHHHHHHHH :
ExpBur :eebbeeeeeebeeebeebbeebe:
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[assembly_id:2]
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