Protein Model on 4hlq_B_1_A_1
(TEMPLATE: 
4hlq
)Protein Model on 4hlq_B_1_A_1
(TEMPLATE: 4hlq
)| CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(RAB7A_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [172 aa] | Ras-related protein Rab-1B :RAB1B_HUMAN | |
| 2 | b | A 1 (A) | polymer(polypeptide(L)) [280 aa] | TBC1 domain family member 20 :TBC20_HUMAN | 17S 18G 36Q(S) 37Y 38K(I) 39A(S) 40T 41I 42G 43A(V) 44D 45F 60Q 62W 65A 66G 67Q 69R 70F 72S(T) 73L(I) 77F(Y) 94N(E) (identity: 65.2 %/40.3 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:4hlq_B_1 identity=40.3% |
queryA 8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107
:* * ******* * * *** ** * *********** **** * *** * * :
4hlq_B_1 9:LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEID: 108
SecStr :EEEEEEEE SSSSHHHHHHHHHT SS SEEEEEEEEEETTEEEEEEEEEE SGGGHHHHGGGSTT SEEEEEEETT HHHHHHHHHHHHHHH:
ExpBur :ebebbbbbbeebbbbbbbbbbbeeeeeeeeeeeeeeeeeeeebebeebebebbbebbbbeeeebeebbeebeebbbbbbbbbbeeeebbeebeebbebbe:
Contact : bb bbbbbbbbbb b b bbb bb bb b b
queryA 108:IQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIA: 170
: ** ** *** ** * ** ***** * ****** * *:
4hlq_B_1 109:RYAS----ENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMA: 167
SecStr :HHS ----TT EEEEEEE TT TT S HHHHHHHHHHHT EEEEBSSSSTBHHHHHHHHH:
ExpBur :eebe----eebbebbbbbebeeeeeeebeeeebbeebeeeebeebebbbeeeeebeebbeebb:
|
[assembly_id:1]
[help]