Protein Model on 4fmd assembly_id=3 (TEMPLATE: 4fmd assembly_id:3 )

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description b(query A)
1 a E 1 (E) polymer(polypeptide(L)) [350 aa] EspG protein :Q5WMC0_ECOLX 17S 18G 38K(I) 39A(S) 40T 41I 42G 43A(V) 45F 47T(I) 62W 65A 66G 67Q 68E 69R 70F 72S(T) 73L(I) 76A(S) 77F(Y) 89D 91T 126K (identity: 66.7 %/38.2 %)
2 b A(RAB7A_HUMAN) F 1 (F) polymer(polypeptide(L)) [149 aa] Ras-related protein Rab-1A :RAB1A_HUMAN
3 c N 1 (E) non-polymer(PEG) DI(HYDROXYETHYL)ETHER
4 d O 1 (F) non-polymer(AF3) ALUMINUM FLUORIDE 16D 17S 18G 21K 40T 66G (identity: 100.0 %/38.2 %)
5 e P 1 (F) non-polymer(GDP) GUANOSINE-5'-DIPHOSPHATE 16D 17S 18G 19V 20G 21K 22T(S) 23S(C) 33F(Y) 40T 125N 126K 128D 129L 155S 156A 157K (identity: 82.4 %/38.2 %)
6 f Q 1 (F) non-polymer(MG) MAGNESIUM ION 22T(S) 40T 63D (identity: 66.7 %/38.2 %)
ALIGNMENTS
MODEL[2] Protein A "queryA" TEMPLATE:4fmd_F_1 identity=38.2%
queryA        10:KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQ: 109
                :*    *******  *               *** **               **********       ****     * ***    *     *  *    :
4fmd_F_1       1:KLLLIGDSGVGKSCLLLRFADDTYTXXXISTIGVDFKIRXXXXXXXXXXXXIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRY: 100
SecStr          :  EEEE TTSSHHHHHHHHHHS   ---    SEEE   ------------ EEE  SGGGHHHHHTTGGG SEEEEEEESS HHHHHTHHHHHHHHHHH:    
ExpBur          :ebbbbbbeebbbeebbbbeeeeeee---eebebeeeeee------------bebbbbeeeebeebbeebeebebbbbbbbbeeeebbebbeebbebbeee:    
Contact         :      daaeedee         e    aaaaaa a a              af aaaaaa aa  aa           a a                  
Contact         :      edd  ef                 d                         d                                           
Contact         :       ee                     e                                                                     
Contact         :                              f                                                                     

queryA       110:ASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIA: 170
                :**    **      *** **    *              **  ***** * **** * * *:
4fmd_F_1     101:AS----ENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMA: 157
SecStr          :S ----TT EEEEEEE TT  TT  S HHHHHHHHGGGT  EEE BTTTTBTHHHHHHHHH:    
ExpBur          :be----eebbebbbbbebeeeeeeebeeeebeeebeeeebebbebbbeeeeebeebbeebe:    
Contact         :               ea ee                         eee                                                    
Contact         :                e                                                                                   


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