Protein Model on 3tw8_B_1_A_1
(TEMPLATE: 
3tw8
)Protein Model on 3tw8_B_1_A_1
(TEMPLATE: 3tw8
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(RAB7A_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [169 aa] | Ras-related protein Rab-35 :RAB35_HUMAN | |
| 2 | b | A 1 (A) | polymer(polypeptide(L)) [343 aa] | DENN domain-containing protein 1B :DEN1B_HUMAN | 10K 12I(L) 17S 36Q(S) 37Y 38K(I) 39A(T) 40T 41I 42G 43A(V) 44D 45F 62W 64T 65A 66G 69R 70F 71Q(R) 72S(T) 73L(I) 74G(T) 75V(S) 76A(T) 77F(Y) 79R 80G 81A(T) 114D(N) (identity: 53.3 %/37.4 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:3tw8_B_1 identity=37.4% |
queryA 8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107
:* * * ******* ** * *** ** * * *********** *** * *** * * * :
3tw8_B_1 9:LFKLLIIGDSGVGKSSLLLRFADNTXXXSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEI-: 107
SecStr :EEEEEEE TTS HHHHHHHH S --- TTTTSEEEEEEEEEETTEEEEEEEEEETTGGG SS GGGGTT SEEEEEEETT HHHHHHHHHHHHHH-:
ExpBur :ebebbbbbbeebbbeebbeebbeee---eebeeeeebebebeeeeeeeebebbbebeebbeeeeebeeeebeebebbbbbbbbeeeebbebbeebbeeb-:
Contact : b b b bbbbbbbbbb b bbb bbbbbbbbb bbb
queryA 108:IQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALK: 175
: *** * * * * ******* *** * * * :
3tw8_B_1 108:----NQNCDDVCRILVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLR: 171
SecStr :----HHH TTSEEEEEEE TT GGG S HHHHHHHHHHHT EEE BTTTTBSHHHHHHHHHHHHHH:
ExpBur :----eeebeebbbbbbbbeeeeeeeeebeeeebeebbeebebebbbbbbeeeeebeebbebbbebbbe:
Contact : b
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[assembly_id:1]
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