Protein Model on 3tso_A_1_K_1 (TEMPLATE: 3tso )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(RAB7A_HUMAN) A 1 (A) polymer(polypeptide(L)) [169 aa] Ras-related protein Rab-25 :RAB25_HUMAN
2 b K 1 (A) non-polymer(PO4) PHOSPHATE ION 96F(Y) 97K(A) 99L(V) 100D(E) 142W(F) (identity: 0.0 %/39.6 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:3tso_A_1 identity=39.6%
queryA         8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107
                :  **   * ****** *        **     ***  * *  **     *  ******* **      * ****    **** *   *      *  *  :
3tso_A_1      10:VFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELY: 109
SecStr          :EEEEEEES TTSSHHHHHHHHHHS          SEEEEEEEEEETTEEEEEEEEEE    S  TTHHHHHTT  EEEEEEETT HHHHHTHHHHHHHHH:    
ExpBur          :ebbbbbbbbeebbbebbbbbbbeeeeeeeeeebeeeeebeeebebeebebebebebbbbeeeebeebeebbeebebbbbbbbbbeeebbebbeebbeebe:    
Contact         :                                                                                        bb bb       

queryA       108:IQASPRDPENFPFVVLGNKIDL-ENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR: 171
                :  *             *** **   * * *  *       *     ****    *** ** *   :
3tso_A_1     110:DHAEA----TIVVMLVGNKSDLSQAREVPTEEARMFA-ENNGLLFLETSALDSTNVELAFETVLK: 169
SecStr          :TSS T----T EEEEEEE GGGGGG  S HHHHHHHH-HHHT EEEE  TTT TTHHHHHHHHHH:    
ExpBur          :eeeee----ebbbbbbbbebeeeeeeebeeeebeeeb-eeeebebbbbbbeeeeebeebbebbbe:    
Contact         :                                   b                                                                


Input Residue Numbers for Focused Sites

ex) 2,15,123