Protein Model on 3sfv_A_1_B_1
(TEMPLATE: 
3sfv
)Protein Model on 3sfv_A_1_B_1
(TEMPLATE: 3sfv
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(RAB7A_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [179 aa] | Ras-related protein Rab-1A :RAB1A_HUMAN | |
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [342 aa] | LidA protein, substrate of the Dot/Icm system :A5IFX1_LEGPC | 8L 17S 18G 30N(D) 33F(Y) 34S(T) 36Q(S) 37Y 38K(I) 39A(S) 41I 42G 43A(V) 44D 45F 47T(I) 58T(K) 60Q 62W 67Q 69R 70F 72S(T) 73L(I) 76A(S) 77F(Y) 79R 91T 92A(D) 101S(Q) 104D(Q) 107L(D) 108I(R) 109Q(Y) 126K (identity: 45.7 %/40.3 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:3sfv_A_1 identity=40.3% |
queryA 8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107
:* * ******* * * *** ** * *********** **** * *** * * * :
3sfv_A_1 16:LFKLLLIGDSGVGKNCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEID: 115
SecStr :EEEEEEESSTTSSHHHHHHHHHH SS SS EEEEEEEEETTEEEEEEEEE SGGG TTHHHHTTT EEEEEEETT HHHHHTHHHHHHHHH:
ExpBur :ebbbbbbbbeebbbeebbebbbeeeeeeeeeeeeeeeeeeeebebeeebbebebbbbbeeeeebeebeeebeebebbbbbbbbeeeebbeebeebbebbe:
Contact :b bb b bb bbbb bbbbb b b b b b bb bb bb b bb b b b
queryA 108:IQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIA: 170
: ** ** *** ** * ** ***** * **** * * *:
3sfv_A_1 116:RYAS----ENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMA: 174
SecStr :HHS ----TT EEEEEEE TT GGG S HHHHHHHHHHHT EEE TTT TTHHHHHHHHH:
ExpBur :eebe----eebbebbbbbebeeeeeeebeeeebeebbeeeebebbbbbbeeeeebeebbebbb:
Contact :bb b
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[assembly_id:1]
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