Protein Model on 2wwx_A_1_B_1
(TEMPLATE: 
2wwx
)Protein Model on 2wwx_A_1_B_1
(TEMPLATE: 2wwx
)| CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(RAB7A_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [170 aa] | RAS-RELATED PROTEIN RAB-1 :RAB1A_HUMAN | |
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [200 aa] | DRRA :Q29ST3_LEGPN | 8L 10K 12I(L) 16D 17S 31K(D) 33F(Y) 35N(E) 36Q(S) 37Y 38K(I) 40T 41I 42G 43A(V) 44D 45F 58T(K) 60Q 62W 64T 65A 66G 67Q 68E 69R 70F 71Q(R) 76A(S) 77F(Y) 79R 80G 98T(N) 102W (identity: 64.7 %/39.6 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:2wwx_A_1 identity=39.6% |
queryA 8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107
:* * ******* * * *** ** * *********** **** * *** * * * :
2wwx_A_1 8:LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEID: 107
SecStr :EEEEEEE TTSSHHHHHTTSB HHHHHH SEEEEEEEETTEEEEEEEE TTGGG S GGGTSS SEEEEEEETT HHHHHHHHHHHHHHH:
ExpBur :ebebbbbbeeebbbebbbeebeeeeeeeeeeeeeeeebebeebeeeeeebbbbbeeeeebeeebebeeebeeebebbbbbbbbbeeebbeebeebbebbe:
Contact :b b b bb b b bbbb bbbbbb b b b bbbbbbbb bb bb b b
queryA 108:IQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIA: 170
: ** ** * * ** * ** ***** * **** * * *:
2wwx_A_1 108:RYAS----ENVNKLLVGIKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMA: 166
SecStr :HHS ----TTSEEEEEEEE TTS S HHHHHHHHHHHT EEEEETTB HHHHHHHHHHH:
ExpBur :eebe----eebbbbbbbbeeeeeeeeebeeeebeebbeeeebebbebeeeeeeebbeebeebb:
|
[assembly_id:1]
[help]