Protein Model on 2il1 assembly_id=2 (TEMPLATE: 2il1 assembly_id:2 )

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(RAB7A_HUMAN) A 1 (A) polymer(polypeptide(L)) [163 aa] Rab12 :RAB43_HUMAN
2 b A 2 (A) polymer(polypeptide(L)) [163 aa] Rab12 :RAB43_HUMAN 51M(E) 52V(L) 53D(R) 128D 158E(D) 159A(N) 160I(F) 161N 163E(D) 164Q(E) 167Q(L) (identity: 18.2 %/37.2 %)
3 c B 1 (A) non-polymer(MG) MAGNESIUM ION 22T (identity: 100.0 %/37.2 %)
4 d B 2 (A) non-polymer(MG) MAGNESIUM ION
5 e C 1 (A) non-polymer(CA) CALCIUM ION 163E(D) 164Q(E) (identity: 0.0 %/37.2 %)
6 f C 2 (A) non-polymer(CA) CALCIUM ION 163E(D) 164Q(E) (identity: 0.0 %/37.2 %)
7 g D 1 (A) non-polymer(GDP) GUANOSINE-5'-DIPHOSPHATE 16D(S) 17S(R) 18G 19V 20G 21K 22T 23S 125N 126K 128D 129L(C) 155S 156A 157K (identity: 80.0 %/37.2 %)
8 h D 2 (A) non-polymer(GDP) GUANOSINE-5'-DIPHOSPHATE
9 i E 1 (A) non-polymer(UNX) UNKNOWN ATOM OR ION 152F(C) 161N 164Q(E) (identity: 33.3 %/37.2 %)
10 j E 2 (A) non-polymer(UNX) UNKNOWN ATOM OR ION
11 k F 1 (A) non-polymer(UNX) UNKNOWN ATOM OR ION 145S(Q) (identity: 0.0 %/37.2 %)
12 l F 2 (A) non-polymer(UNX) UNKNOWN ATOM OR ION
13 m G 1 (A) non-polymer(UNX) UNKNOWN ATOM OR ION 128D 158E(D) (identity: 50.0 %/37.2 %)
14 n G 2 (A) non-polymer(UNX) UNKNOWN ATOM OR ION
15 o H 1 (A) non-polymer(UNX) UNKNOWN ATOM OR ION 129L(C) (identity: 0.0 %/37.2 %)
16 p H 2 (A) non-polymer(UNX) UNKNOWN ATOM OR ION
17 q I 1 (A) non-polymer(UNX) UNKNOWN ATOM OR ION 104D(K) 107L(D) (identity: 0.0 %/37.2 %)
18 r I 2 (A) non-polymer(UNX) UNKNOWN ATOM OR ION
19 s J 1 (A) non-polymer(UNX) UNKNOWN ATOM OR ION 128D 129L(C) 130E (identity: 66.7 %/37.2 %)
20 t J 2 (A) non-polymer(UNX) UNKNOWN ATOM OR ION
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:2il1_A_1 identity=37.2%
queryA         9:LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLI: 108
                :* *** *  ********              * * **  * *         *********** *   * ** *    ** * *   **  *  *      :
2il1_A_1      27:LQVIIIGSRGVGKTSLMERFTDXXXXXXXXSTVGVDFKIKTVELRGKKIRLQIWDTAGQERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDK: 126
SecStr          :EEEEEE STTSSHHHHHHHH  --------  TTEEEEEEEEEETTEEEEEEEEEE  SGGGHHHHHHHHHH SEEEEEEETT HHHHHTHHHHHHHHHH:    
ExpBur          :bebbbbbbeebbbeebbeebbe--------eeeebeeeeeebebeebebebbbbbbbbeeeebeebbeebeebebbbbbbbbbeeebbeebeebbebbee:    
Contact         :       ggggggcg                           bbb                                                  q  q 
Contact         :             g                                                                                      

queryA       109:QASPRDPENFPFVVLGNKIDLE-NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQ: 176
                : **    *       *** * *  *                    * ***   **   *       ** :
2il1_A_1     127:YAS----EDAELLLVGNKLDCETDREITRQQGEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDILKK: 191
SecStr          :HS ----TT EEEEEEE GGGGGG  S HHHHHHHHHTSTT EEEE BTTTTBSHHHHHHHHHHHHHHT:    
ExpBur          :ebe----eebebbbbbbeeeeeeeeebeeeebeebbeeeeebebbbbbbeeeeebeebbeebbbbbbee:    
Contact         :                gg bgss              k      i  gggbbbb bb  b                                        
Contact         :                   go                             m  i ee                                           
Contact         :                   ms                                  ff                                           
Contact         :                   s                                    i                                           


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