CurrentView:JAVA Change to:[HTML5] |
DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
|
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(RAB7A_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [163 aa] | Rab12 :RAB43_HUMAN | |
2 | b | B 1 (A) | non-polymer(MG) | MAGNESIUM ION | 22T (identity: 100.0 %/37.2 %) | |
3 | c | C 1 (A) | non-polymer(CA) | CALCIUM ION | 163E(D) 164Q(E) (identity: 0.0 %/37.2 %) | |
4 | d | D 1 (A) | non-polymer(GDP) | GUANOSINE-5'-DIPHOSPHATE | 16D(S) 17S(R) 18G 19V 20G 21K 22T 23S 125N 126K 128D 129L(C) 155S 156A 157K (identity: 80.0 %/37.2 %) | |
5 | e | E 1 (A) | non-polymer(UNX) | UNKNOWN ATOM OR ION | 152F(C) 161N 164Q(E) (identity: 33.3 %/37.2 %) | |
6 | f | F 1 (A) | non-polymer(UNX) | UNKNOWN ATOM OR ION | 145S(Q) (identity: 0.0 %/37.2 %) | |
7 | g | G 1 (A) | non-polymer(UNX) | UNKNOWN ATOM OR ION | 128D 158E(D) (identity: 50.0 %/37.2 %) | |
8 | h | H 1 (A) | non-polymer(UNX) | UNKNOWN ATOM OR ION | 129L(C) (identity: 0.0 %/37.2 %) | |
9 | i | I 1 (A) | non-polymer(UNX) | UNKNOWN ATOM OR ION | 104D(K) 107L(D) (identity: 0.0 %/37.2 %) | |
10 | j | J 1 (A) | non-polymer(UNX) | UNKNOWN ATOM OR ION | 128D 129L(C) 130E (identity: 66.7 %/37.2 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:2il1_A_1 identity=37.2% |
queryA 9:LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLI: 108 :* *** * ******** * * ** * * *********** * * ** * ** * * ** * * : 2il1_A_1 27:LQVIIIGSRGVGKTSLMERFTDXXXXXXXXSTVGVDFKIKTVELRGKKIRLQIWDTAGQERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDK: 126 SecStr :EEEEEE STTSSHHHHHHHH -------- TTEEEEEEEEEETTEEEEEEEEEE SGGGHHHHHHHHHH SEEEEEEETT HHHHHTHHHHHHHHHH: ExpBur :bebbbbbbeebbbeebbeebbe--------eeeebeeeeeebebeebebebbbbbbbbeeeebeebbeebeebebbbbbbbbbeeebbeebeebbebbee: Contact : ddddddbd i i Contact : d queryA 109:QASPRDPENFPFVVLGNKIDLE-NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQ: 176 : ** * *** * * * * *** ** * ** : 2il1_A_1 127:YAS----EDAELLLVGNKLDCETDREITRQQGEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDILKK: 191 SecStr :HS ----TT EEEEEEE GGGGGG S HHHHHHHHHTSTT EEEE BTTTTBSHHHHHHHHHHHHHHT: ExpBur :ebe----eebebbbbbbeeeeeeeeebeeeebeebbeeeeebebbbbbbeeeeebeebbeebbbbbbee: Contact : dd ddjj f e dddg e cc Contact : gh e Contact : jj |