Protein Model on 2il1 assembly_id=1 (TEMPLATE: 2il1 assembly_id:1 )

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(RAB7A_HUMAN) A 1 (A) polymer(polypeptide(L)) [163 aa] Rab12 :RAB43_HUMAN
2 b B 1 (A) non-polymer(MG) MAGNESIUM ION 22T (identity: 100.0 %/37.2 %)
3 c C 1 (A) non-polymer(CA) CALCIUM ION 163E(D) 164Q(E) (identity: 0.0 %/37.2 %)
4 d D 1 (A) non-polymer(GDP) GUANOSINE-5'-DIPHOSPHATE 16D(S) 17S(R) 18G 19V 20G 21K 22T 23S 125N 126K 128D 129L(C) 155S 156A 157K (identity: 80.0 %/37.2 %)
5 e E 1 (A) non-polymer(UNX) UNKNOWN ATOM OR ION 152F(C) 161N 164Q(E) (identity: 33.3 %/37.2 %)
6 f F 1 (A) non-polymer(UNX) UNKNOWN ATOM OR ION 145S(Q) (identity: 0.0 %/37.2 %)
7 g G 1 (A) non-polymer(UNX) UNKNOWN ATOM OR ION 128D 158E(D) (identity: 50.0 %/37.2 %)
8 h H 1 (A) non-polymer(UNX) UNKNOWN ATOM OR ION 129L(C) (identity: 0.0 %/37.2 %)
9 i I 1 (A) non-polymer(UNX) UNKNOWN ATOM OR ION 104D(K) 107L(D) (identity: 0.0 %/37.2 %)
10 j J 1 (A) non-polymer(UNX) UNKNOWN ATOM OR ION 128D 129L(C) 130E (identity: 66.7 %/37.2 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:2il1_A_1 identity=37.2%
queryA         9:LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLI: 108
                :* *** *  ********              * * **  * *         *********** *   * ** *    ** * *   **  *  *      :
2il1_A_1      27:LQVIIIGSRGVGKTSLMERFTDXXXXXXXXSTVGVDFKIKTVELRGKKIRLQIWDTAGQERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDK: 126
SecStr          :EEEEEE STTSSHHHHHHHH  --------  TTEEEEEEEEEETTEEEEEEEEEE  SGGGHHHHHHHHHH SEEEEEEETT HHHHHTHHHHHHHHHH:    
ExpBur          :bebbbbbbeebbbeebbeebbe--------eeeebeeeeeebebeebebebbbbbbbbeeeebeebbeebeebebbbbbbbbbeeebbeebeebbebbee:    
Contact         :       ddddddbd                                                                                i  i 
Contact         :             d                                                                                      

queryA       109:QASPRDPENFPFVVLGNKIDLE-NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQ: 176
                : **    *       *** * *  *                    * ***   **   *       ** :
2il1_A_1     127:YAS----EDAELLLVGNKLDCETDREITRQQGEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDILKK: 191
SecStr          :HS ----TT EEEEEEE GGGGGG  S HHHHHHHHHTSTT EEEE BTTTTBSHHHHHHHHHHHHHHT:    
ExpBur          :ebe----eebebbbbbbeeeeeeeeebeeeebeebbeeeeebebbbbbbeeeeebeebbeebbbbbbee:    
Contact         :                dd ddjj              f      e  dddg  e cc                                           
Contact         :                   gh                                   e                                           
Contact         :                   jj                                                                               


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