Protein Model on 1z0k_A_1_B_1
(TEMPLATE: 
1z0k
)Protein Model on 1z0k_A_1_B_1
(TEMPLATE: 1z0k
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[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(RAB7A_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [169 aa] | GTP-binding protein :RAB4A_HUMAN | |
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [61 aa] | FYVE-finger-containing Rab5 effector protein rabenosyn-5 :Q59EY8_HUMAN | 25M(L) 26N(H) 29V(I) 41I 42G 43A(V) 44D(E) 45F 46L(G) 47T(S) 58T(K) 60Q 62W 69R 70F 73L(V) 76A(S) 77F(Y) (identity: 38.9 %/38.4 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:1z0k_A_1 identity=38.4% |
queryA 8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107
:* * * * ** * * *** *** * * * * ******* *** * **** ** * * * * * *:
1z0k_A_1 8:LFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGLERFRSVTRSYYRGAAGALLVYDITSRETYNALTNW----L: 103
SecStr :EEEEEEEESTTSSHHHHHHHHHHSS SS SSEEEEEEEEEETTEEEEEEEEEE SGGGHHHHHTT TT SEEEEEEETT HHHHHTHHHH----H:
ExpBur :ebebbbbbeeebbbbbbbbbbeeeeeeeeeeebebeeebeeebebeeeebebebebbbbeeebeeebeeebeebebbbbbbbbbeeebbebbeeb----b:
Contact : bb b bbbbbbb b b b bb b bb
queryA 108:IQASPRDPENFPFVVLGNKIDLE-NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQ: 176
: * * *** ** * * * * **** ** ** ** * :
1z0k_A_1 104:TDARMLASQNIVIILCGNKKDLDADREVTFLEASRFA-QENELMFLETSALTGEDVEEAFVQCARKILNK: 172
SecStr :HHHHHHS TT EEEEEEE TT GGG S HHHHHHHH-HHTT EEEE TTT TTHHHHHHHHHHHHH :
ExpBur :eebbeebeeebbbbbbbbeeeeeeeeebeeebbeebb-eeeebbbbbbbbeeeeebeebbbebbeeeeee:
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[assembly_id:1]
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