[pdbjlvh2]Protein Model on 1s8f_B_1_J

Protein Model on 1s8f_B_1_J_1 (TEMPLATE: 1s8f )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2] [assembly_id:3] [assembly_id:4] [assembly_id:5]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(RAB7A_HUMAN)	B 1 (B)	polymer(polypeptide(L)) [173 aa]	Ras-related protein Rab-9A :RAB9A_CANFA
2	b		J 1 (B)	non-polymer(CL)	CHLORIDE ION	71Q(R) 74G(R) 75V(T) 109Q(Y) (identity: 0.0 %/56.5 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:1s8f_B_1 identity=56.5%

queryA         5:KKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRD: 104
                :*  * *** *** **** **** **  **      ***  ** *   **   ************** **   **** *** * * *     *  *  *  :
1s8f_B_1       6:KSSLFKVILLGDGGVGKSSLMNRYVTNKFDXXLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKK: 105
SecStr          : EEEEEEEEE  TTSSHHHHHHHHHHS   --     EEEEEEEEEEETTEEEEEEEEEEESS   HHHHHHHHTT SEEEEEEETT HHHHHTHHHHHH:    
ExpBur          :eebebbbbbbbbeebbbeebbbbbbeebee--eeeeebebeeeeeeeeeebebebebbbbbeeeeeeeeeeebbeebebbbbbbbbeeeebbebbeebbe:    
Contact         :                                                                  b  bb                             

queryA       105:EFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNAL: 174
                :**   *    ** **** ******   *** *  *****      ******** * **  **    *  *:
1s8f_B_1     106:EFIYYADVKEPESFPFVILGNKIDISERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVL: 175
SecStr          :HHHHHTT S GGGS EEEEEE TT S  SS HHHHHHHHHHTT   EEE  TTT TTHHHHHHHHHHHH :    
ExpBur          :ebeeebebeeeeebbbbbbbbeeeeeeeebeeeebeebbeeeeebebbbbbbeeeeebeebbeebbebee:    
Contact         :    b

Protein Model on 1s8f_B_1_J_1 (TEMPLATE: 1s8f )

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