Protein Model on 1g16 assembly_id=1 (TEMPLATE: 1g16 assembly_id:1 )

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description c(query A)
1 a A 1 (A) polymer(polypeptide(L)) [159 aa] RAS-RELATED PROTEIN SEC4 :SEC4_YEAST
2 b B 1 (B) polymer(polypeptide(L)) [161 aa] RAS-RELATED PROTEIN SEC4 :SEC4_YEAST 8L(I) 45F 60Q (identity: 66.7 %/39.0 %)
3 c A(RAB7A_HUMAN) C 1 (C) polymer(polypeptide(L)) [167 aa] RAS-RELATED PROTEIN SEC4 :SEC4_YEAST
4 d D 1 (D) polymer(polypeptide(L)) [160 aa] RAS-RELATED PROTEIN SEC4 :SEC4_YEAST 41I 42G 44D 67Q 68E 69R 70F 71Q(R) 74G(T) 76A 79R (identity: 81.8 %/39.0 %)
5 e E 1 (A) non-polymer(CO) COBALT (II) ION
6 f F 1 (A) non-polymer(CO) COBALT (II) ION
7 g G 1 (A) non-polymer(GDP) GUANOSINE-5'-DIPHOSPHATE
8 h H 1 (B) non-polymer(CO) COBALT (II) ION
9 i I 1 (B) non-polymer(GDP) GUANOSINE-5'-DIPHOSPHATE
10 j J 1 (C) non-polymer(CO) COBALT (II) ION 22T(S) 63D 64T (identity: 66.7 %/39.0 %)
11 k K 1 (C) non-polymer(CO) COBALT (II) ION 31K(D) 159A(D) 163E(N) (identity: 0.0 %/39.0 %)
12 l L 1 (C) non-polymer(GDP) GUANOSINE-5'-DIPHOSPHATE 16D 17S 18G 19V 20G 21K 22T(S) 23S(C) 33F 34S(N) 35N(P) 125N 126K 128D 129L(U) 155S 156A 157K (identity: 72.2 %/39.0 %)
13 m M 1 (D) non-polymer(CO) COBALT (II) ION
14 n N 1 (D) non-polymer(CO) COBALT (II) ION
15 o O 1 (D) non-polymer(CO) COBALT (II) ION
16 p P 1 (D) non-polymer(GDP) GUANOSINE-5'-DIPHOSPHATE
ALIGNMENTS
MODEL[3] Protein A "queryA" TEMPLATE:1g16_C_1 identity=39.0%
queryA         8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107
                :  *    *******  *    *  **      *** **  * *      *  ***********     * ****    ** * *   **     *     :
1g16_C_1       3:IUKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQIWDTAGQERFRTITTAYYRGAUGIILVYDITDERTFTNIKQW----F:  98
SecStr          :EEEEEEE STTSSHHHHHHHHHH    TT    SS  EEEEEEESSSSEEEEEEE   GGGGGGGGSHHHHTT SEEEEEEETT HHHHHTHHHH----H:    
ExpBur          :ebbbbbbbbeebbbebbbbbbeeeeeeeeeeeeeeebeeeeebebeeeebebebbbbeeeeeeebeeeebbeebebbbbbbbbeeeebbeebeeb----e:    
Contact         :b       lllllljl       k lll     dd db              b  jj  ddddd  d d  d                            
Contact         :              l                                                                                     

queryA       108:IQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR: 171
                :                *** * * * *      *       **  * ***   **   * * * :
1g16_C_1      99:KTVNEHANDEAQLLLVGNKSDUETRVVTADQGEALA-KELGIPFIESSAKNDDNVNEIFFTLAK: 161
SecStr          :HHHHHHS TT EEEEEEE TT TT  S HHHHHHHH-HHHT  EEE BTTTTBSHHHHHHHHHH:    
ExpBur          :ebbeeebeeebebbbbbbeeeeeeeebeeeebeebb-eebebeebbbbbeeeeebeebbeebbe:    
Contact         :                 ll ll                         lll k   k                                            


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