Protein Model on 1g16_B_1_C_1 (TEMPLATE: 1g16 )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(RAB7A_HUMAN) B 1 (B) polymer(polypeptide(L)) [161 aa] RAS-RELATED PROTEIN SEC4 :SEC4_YEAST
2 b C 1 (C) polymer(polypeptide(L)) [167 aa] RAS-RELATED PROTEIN SEC4 :SEC4_YEAST 130E 132R 137K(D) (identity: 66.7 %/37.1 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:1g16_B_1 identity=37.1%
queryA         8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107
                :  *    *******  *    *  **          **  * *      *  ***********     * ****    ** * *   **     *     :
1g16_B_1       3:IUKILLIGDSGVGKSCLLVRFVEDKFNPXXXXXXXIDFKIKTVDINGKKVKLQIWDTAGQERFRTITTAYYRGAUGIILVYDITDERTFTNIKQW----F:  98
SecStr          : EEEEEESSTTSSHHHHHHHHHT     -------  EEEEEEESSSSEEEEEEEE TT TTTS   HHHHTTEEEEEEEEETT HHHHHTHHHH----H:    
ExpBur          :ebbbbbbbbeebbbeebbebbeeeeeee-------eeeeeeebebeeeebebebbbbeeebeeeebeeebbeebebbbbbbbbeeeebbeebeeb----e:    

queryA       108:IQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR: 171
                :                *** * * * *      *       **  * ***   **   * * * :
1g16_B_1      99:KTVNEHANDEAQLLLVGNKSDUETRVVTADQGEALA-KELGIPFIESSAKNDDNVNEIFFTLAK: 161
SecStr          :HHHHTTS TT EEEEEEE TT TT  S HHHHHHHH-HHHT  EEE BTTTTBSHHHHHHHHHH:    
ExpBur          :ebbeeebeeebbbbbbbbeeeeeeeebeeeebeebb-eebebebbbbbbeeeeebeebbeebbe:    
Contact         :                      b b    b                                                                      


Input Residue Numbers for Focused Sites

ex) 2,15,123