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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(IMA1_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [422 aa] | KARYOPHERIN ALPHA :IMA1_YEAST | |
2 | b | B 1 (B) | polymer(polypeptide(L)) [422 aa] | KARYOPHERIN ALPHA :IMA1_YEAST | 150G 151T 238R 239N(G) 240K 241N(K) 273W 315R 390D(E) 391F(Y) 392K 395K 430T(E) 431A(I) 433D 477Q 478N(Q) 479H(N) 480E 482E(D) 485Y 489L(Y) 493E (identity: 56.5 %/49.6 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:1bk5_A_1 identity=49.6% |
queryA 81:IVKGINSSNVENQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGRTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISE: 180 : ** ** ** * **** **** * ** * * * * * ************ *** *** * * ** ** *: 1bk5_A_1 4:MTQQLNSDDMQEQLSATVKFRQILSREHRPPIDVVIQAGVVPRLVEFMRENQPEMLQLEAAWALTNIASGTSAQTKVVVDADAVPLFIQLLYTGSVEVKE: 103 SecStr :HHHHHT S HHHHHHHHHHHHHHTT SS HHHHHHTT HHHHHHTTSTTS HHHHHHHHHHHHHHHTS HHHHHHHHHTT HHHHHHHHHHS HHHHH: ExpBur :bbeebebeeeeebeebbeebbebbeeeeeeebeebeeeebbebbbebbeeebeeebbbbbbebbbbbbeeeeebbeebbebebbebbbebbeebeeebee: Contact : bb queryA 181:QAVWALGNIAGDGSVFRDLVIKYGAVDPLLALLAVPDMSSLACGYLRNLTWTLSNLCRNKNPAPPIDAVEQILPTLVRLLHHDDPEVLADTCWAISYLTD: 280 :** ***** *** ** * * * * * * * ********* * * * * * **** * * * * * ******* *: 1bk5_A_1 104:QAIWALGNVAGDSTDYRDYVLQCNAMEPILGLF-----NSNKPSLIRTATWTLSNLCRGKKPQPDWSVVSQALPTLAKLIYSMDTETLVDACWAISYLSD: 198 SecStr :HHHHHHHHHHHH HHHHHHHHHTT HHHHHHGG-----GS HHHHHHHHHHHHHHH SSS HHHHGGGHHHHHHHTT S HHHHHHHHHHHHHHTT: ExpBur :bbbebbbbbbeeeeebbeebbeeebbebbbebb-----eeeeeebbeebbebbbbbbeeeeeebeeebbeebbebbbebbeeeeeebbbbbbebbbbbbe: Contact : bbbb b queryA 281:GPNERIGMVVKTGVVPQLVKLLGASELPIVTPALRAIGNIVTGTDEQTQVVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVP: 380 :** * * * ** ** ****** ****** * ****** ** * ** ** ** *** ** ****** *** * * *: 1bk5_A_1 199:GPQEAIQAVIDVRIPKRLVELLSHESTLVQTPALRAVGNIVTGNDLQTQVVINAGVLPALRLLLSSPKENIKKEACWTISNITAGNTEQIQAVIDANLIP: 298 SecStr :S HHHHHHHHHTT HHHHHHHTT S HHHHHHHHHHHHHHTTS HHHHHHHHHTTHHHHHHHHTT SSHHHHHHHHHHHHHHHTS HHHHHHHHHTT HH: ExpBur :beeebbeebbeeebbeebbebbebeeeebbebbbebbbbbbeeeeebbeebbebebbebbeebbebeeeebeebbbebbbebbeeebebbeebbeeebbe: Contact : b queryA 381:FLVSVLSKADFKTQKEAVWAVTNYTSGGTV--EQIVYLVHCGIIEPLMNLLTAKDTKIILVILDAISNIFQAAEKLGETEKLSI-----MIEECGGLDKI: 473 : ** * * ** *** ** * *** * *** * * ** ** * ** * *** ** * * * * ** ** **: 1bk5_A_1 299:PLVKLLEVAEYKTKKEACWAISNASSGGLQRPDIIRYLVSQGCIKPLCDLLEIADNRIIEVTLDALENILKMGEADKEARGLNINENADFIEKAGGMEKI: 398 SecStr :HHHHHHHHS HHHHHHHHHHHHHHHHTTTT HHHHHHHHHTT HHHHHHHHHH HHHHHHHHHHHHHHHHHHHHHHHHS SS HHHHHHHHHTHHHHH: ExpBur :bbbebbeebeeebbebbbebbbbbbebbeeeeebbeebbeeebbebbbebbeebeeebbebbbebbbebbebbeebeeeeeeeebebbeebeebebeebb: Contact : bbb b bb b queryA 474:EALQNHENESVYKASLSLIEKYF: 496 : * ** * ** **: 1bk5_A_1 399:FNCQQNENDKIYEKAYKIIETYF: 421 SecStr :HHGGG S HHHHHHHHHHHHHH : ExpBur :eebbebeeeebeebbeebbeebb: Contact : bbbb b b b b |