HOMCOS:Small compound-protein complex modeling

Contact Proteins for Similar Compounds

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threshold chemical similarty
(tanimoto coefficient)

[0.5] [0.6] [0.7] [0.8] [0.9] [1.0]

max number of compounds

[1] [5] [10] [20] [30] [40] [50]

Chosen similar compounds

compound	similarity	compound	similarity	compound	similarity	compound	similarity	compound	similarity
query [D09537_1] [2D] [3D]	***	1RP	1.000	K1F	0.958	MZP	0.840	NMN	0.840
AC4	0.769	AMZ	0.769	MDJ	0.769	NCN	0.769	PFU	0.769
3DU	0.731	MDK	0.731	RVP	0.731	FAI	0.714	QRT	0.714
3MU	0.704	5FU	0.704	5CF	0.704	B8Q	0.704	C2R	0.704
ICR	0.704	JMH	0.704	MDQ	0.704	UR3	0.704	GE6	0.697
ONE	0.692	PYO	0.692	5HM	0.679	6CN	0.679	CNU	0.679
E3C	0.679	FNU	0.679	FMU	0.679	HEU	0.679	JW5	0.679
MMX	0.679	RSQ	0.679	U1P	0.679	0C	0.667	0U	0.667
6MI	0.667	8XU	0.667	8XC	0.667	C37	0.667	C25	0.667
C	0.667	C5P	0.667	CAR	0.667	CH	0.667	DHU	0.667
H2U	0.667

Proteins contacting with similar compounds to the query

Nrank	Protein	Nresidue	pdb_id+asym_id
1	Q2ERG0_HAEIF Bcs3	1113	[C5P]:8a0c_B_R
2	A0A401FT36_9DELT CRISPR-associated RAMP family protein	1452	[C]:8gs2_C_E
3	HINT1_HUMAN Histidine triad nucleotide-binding protein 1	115	[C5P]:5km2_A_C
4	Q6SA23_CVHOC Nucleoprotein	132	[C5P]:4lmc_A_B
5	AGO1_ARATH Protein argonaute 1	147	[C5P]:4g0q_A_B
6	I7FJF7_MYCS2 Putative mutator protein MutT2/NUDIX hydrolase	127	[C5P]:5zrh_A_C
7	Q6HT60_BACAN Nicotinate (Nicotinamide) nucleotide adenylyltransferase	189	[NCN]:2qtn_B_H
8	AKAP18 DELTA	205	[C5P]:2vfl_A_B
9	TREX1_MOUSE Three-prime repair exonuclease 1	226	[C5P]:8hce_B_H
10	HIS4_STRCO Phosphoribosyl isomerase A	240	[AMZ]:5dn1_A_E
11	D9J2T9_MOMBA Ribosome inactivating protein	246	[C5P]:4zu0_A_E
12	B5I4P8_9ACTO Phosphoribosyl isomerase A	246	[AMZ]:4tx9_A_C
13	SIAT1_HUMAN Beta-galactoside alpha-2,6-sialyltransferase 1	318	[C]:4js2_A_C
14	5NT3_MOUSE Cytosolic 5'-nucleotidase 3	291	[C]:4kx5_A_B
15	DNLJ_STRZP DNA ligase	281	[NMN]:4glw_B_G
16	SIA4A_PIG CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 1	273	[C5P]:2wnb_A_C
17	A0A179D1D1_9BACT Capsular polysaccharide export system protein KpsC	321	[C5P]:6mgb_A_D
18	Y1598_METJA UPF0284 protein MJ1598	344	[NCN]:6pu6_A_C
19	A0A101DFK9_ARCFL:U5WZP7_MYCKA AfCTD-Phosphatidylinositol-phosphate synthase (PIPS) fusion	336	[C5P]:6wmv_B_Q
20	O27985_ARCFU AF2299, a CDP-alcohol phosphotransferase	341	[C5P]:4o6m_B_KA
21	CNO6L_HUMAN CCR4-NOT transcription complex subunit 6-like	335	[C5P]:5dv2_A_B
22	A0A0H2X5R2_XANC8 Pre-B cell enhancing factor related protein	437	[NMN]:7yqq_B_C
23	A0A0H2X5R2_XANC8 Pre-B cell enhancing factor related protein	464	[NMN]:7yqq_A_C
24	Adenylosuccinate lyase	418	[AMZ]:5nxa_C_O
25	Adenylosuccinate lyase	440	[AMZ]:5nxa_D_O
26	Adenylosuccinate lyase	415	[AMZ]:5nxa_B_O
27	A8QYL1_9GAMM Beta-galactoside alpha-2,6-sialyltransferase	493	[C5P]:2z4t_A_C
28	O86842_STRCO RIBONUCLEASE J	451	[C5P]:5a0v_B_I
29	RNB_ECOLI EXORIBONUCLEASE 2	637	[C5P]:2ix0_A_B
30	A0A401FT52_9DELT CHAT domain-containing protein	464	[C]:8gs2_D_E
31	RM36_HUMAN 39S ribosomal protein L36, mitochondrial	37	[C]:7pd3_E_QB [C]:7pd3_E_WK
32	RM32_HUMAN 39S ribosomal protein L32, mitochondrial	108	[C]:7pd3_A_RD [C]:7pd3_A_HJ
33	RT18A_HUMAN 39S ribosomal protein S18a, mitochondrial	146	[C]:7pd3_ZA_WK [C]:7pd3_ZA_ZK
34	RM17_HUMAN 39S ribosomal protein L17, mitochondrial	152	[C]:7pd3_X_HK [C]:7pd3_X_MK
35	AAKG1_HUMAN 5'-AMP-ACTIVATED PROTEIN KINASE SUBUNIT GAMMA-1	144	[AMZ]:2uv5_A_B [AMZ]:2uv5_A_B
36	Q8IEE9_PLAF7 Cholinephosphate cytidylyltransferase	129	[C5P]:4zcp_A_B [C5P]:4zcp_A_B
37	KTHY_AQUAE Thymidylate kinase	193	[C5P]:5h5k_A_H [C5P]:5h5k_B_K
38	KCY_THET8 Cytidylate kinase	201	[C5P]:3w8n_A_B [C5P]:7ckj_A_B
39	URK_THET8 Uridine kinase	203	[C5P]:3asz_A_C [C5P]:3asz_B_D