#rank pdb_id asym_id(protein) oper_expression(prot) auth_asym_id(prot) comp_id(comp) asym_id(comp) oper_expression(comp) auth_asym_id(comp) auth_seq_id(comp) cluster95(prot) cluster40(prot) clusterE4(prot) uniprot_id(prot) nresidue(prot) pdbx_description(prot) seq_id_aa_contact(prot) 1 5nfs A 1 A D03 B 1 A 201 44824 44824 44824 Q5UEA2_9ENTO 180 Genome polyprotein 41H:72E:109K:128L:129G:143T:144R:145A:146G:147Q:148C:162H:163V:164G:165G:166N 2 3ogq A 1 A AB1 C 1 A 200 28007 28007 28007 POL_FIVPE 112 FIV protease 28L:30D:32G:33A:34D:35I:37V:58G:59I 2 3ogq B 1 B AB1 C 1 A 200 28007 28007 28007 POL_FIVPE 112 FIV protease 28L:30D:32G:33A:34D:56M:57I:58G:59I:101L 3 5n19 A 1 A D03 B 1 A 401 69082 69082 69082 R1AB_CVHSA 306 SARS coronavirus main protease 25T:41H:44C:45T:46A:49M:140F:141L:142N:143G:144S:145C:163H:164H:165M:166E:172H:186V:187D:188R:189Q 3 5n19 A 2 A D03 B 2 A 401 69082 69082 69082 R1AB_CVHSA 306 SARS coronavirus main protease 25T:41H:44C:45T:46A:49M:140F:141L:142N:143G:144S:145C:163H:164H:165M:166E:172H:186V:187D:188R:189Q 4 7ufc A 1 A NJO C 1 A 602 88822 88822 88822 CP3A4_HUMAN 461 Cytochrome P450 3A4 85R:86R:88F:99S:192R:193F:195F:204T:281I:284F:285A:289T:354E 4 7ufc A 2 A NJO C 2 A 602 88822 88822 88822 CP3A4_HUMAN 461 Cytochrome P450 3A4 85R:86R:88F:99S:192R:193F:195F:204T:281I:284F:285A:289T:354E 5 6fv2 A 1 A D03 E 1 A 402 69428 69428 69428 R1AB_CVHNL 301 3C-like proteinase 26V:41H:51I:53Y:139F:140I:141N:142G:143A:144C:163H:164Q:165I:166E:167L:172H:187D:188Q:189P:190S:192Q 5 6fv2 B 1 B D03 G 1 B 402 69428 69428 69428 R1AB_CVHNL 299 3C-like proteinase 25T:26V:41H:47T:139F:140I:141N:142G:143A:144C:163H:165I:166E:167L:168G:172H:187D:188Q:189P:190S:192Q 5 6fv2 C 1 C D03 I 1 C 402 69428 69428 69428 R1AB_CVHNL 299 3C-like proteinase 25T:26V:41H:47T:51I:53Y:139F:140I:141N:142G:143A:144C:163H:164Q:165I:166E:168G:172H:187D:190S 6 1rv7 A 1 A AB1 C 1 B 1001 24188 24188 24188 Q9QM22_9HIV1 99 protease 25N:27G:28A:50I:80T:81P:82A:84V 6 1rv7 B 1 B AB1 C 1 B 1001 24188 24188 24188 Q9QM22_9HIV1 99 protease 23L:80T:81P:82A:84V 6 4l1a A 1 A AB1 C 1 A 101 24188 24188 24188 Q000H7_9HIV1 99 MDR769 HIV-1 protease 8R:25N:27G:28A:29D:30D:50I:80T:81P:82T:84V 6 4l1a B 1 B AB1 C 1 A 101 24188 24188 24188 Q000H7_9HIV1 99 MDR769 HIV-1 protease 8R:25N:27G:28A:29D:48G:81P:82T 7 2rkf A 1 A AB1 D 1 A 501 24370 24370 24370 A0F7J4_9HIV1 99 PROTEASE RETROPEPSIN 25D:27G:28A:29D:30D:32I:49G:50I:81P:84I 7 2rkf B 1 B AB1 D 1 A 501 24370 24370 24370 A0F7J4_9HIV1 99 PROTEASE RETROPEPSIN 23L:25D:27G:28A:29D:30D:32I:48G:49G:50I:82A:84I 7 2rkg A 1 A AB1 D 1 B 501 24370 24370 24370 A0F7J4_9HIV1 100 PROTEASE RETROPEPSIN 23L:25D:27G:28A:29D:30D:48V:49G:50G:51I:85I 7 2rkg B 1 B AB1 D 1 B 501 24370 24370 24370 A0F7J4_9HIV1 100 PROTEASE RETROPEPSIN 25D:27G:28A:29D:30D:32I:48V:50G:51I:82P:85I 8 7ve2 A 1 A AB1 B 1 A 401 73498 73498 73498 Q8I6V3_PLAF7 329 Plasmepsin II 17M:34I:36D:38G:39S:78N:79Y:80V:81S:113F:122F:194Y:216D:218G:219T:220S:296F 8 1lf2 A 1 A R37 B 1 A 330 73498 73498 73498 PLM2_PLAFA 329 Plasmepsin 2 36D:38G:78N:79Y:80V:81S:113F:125I:133L:194Y:216D:218G:219T:220S:292I:296F:302I 8 1lee A 1 A R36 B 1 A 500 73498 73498 73498 PLM2_PLAFA 331 Plasmepsin 2 36D:38G:39S:77M:78N:79Y:80V:81S:113F:125I:133L:194Y:216D:218G:219T:220S:223T:292I:296F:302I 8 1lee A 1 A R36 B 2 A 500 73498 73498 73498 PLM2_PLAFA 331 Plasmepsin 2 242P:243F:244L 8 1lee A 1 A R36 B 3 A 500 73498 73498 73498 PLM2_PLAFA 331 Plasmepsin 2 297P 8 1lee A 2 A R36 B 1 A 500 73498 73498 73498 PLM2_PLAFA 331 Plasmepsin 2 242P:243F:244L 8 1lee A 2 A R36 B 2 A 500 73498 73498 73498 PLM2_PLAFA 331 Plasmepsin 2 36D:38G:39S:77M:78N:79Y:80V:81S:113F:125I:133L:194Y:216D:218G:219T:220S:223T:292I:296F:302I 8 1lee A 2 A R36 B 4 A 500 73498 73498 73498 PLM2_PLAFA 331 Plasmepsin 2 297P 8 1lee A 3 A R36 B 1 A 500 73498 73498 73498 PLM2_PLAFA 331 Plasmepsin 2 297P 8 1lee A 3 A R36 B 3 A 500 73498 73498 73498 PLM2_PLAFA 331 Plasmepsin 2 36D:38G:39S:77M:78N:79Y:80V:81S:113F:125I:133L:194Y:216D:218G:219T:220S:223T:292I:296F:302I 8 1lee A 3 A R36 B 4 A 500 73498 73498 73498 PLM2_PLAFA 331 Plasmepsin 2 242P:243F:244L 8 1lee A 4 A R36 B 2 A 500 73498 73498 73498 PLM2_PLAFA 331 Plasmepsin 2 297P 8 1lee A 4 A R36 B 3 A 500 73498 73498 73498 PLM2_PLAFA 331 Plasmepsin 2 242P:243F:244L 8 1lee A 4 A R36 B 4 A 500 73498 73498 73498 PLM2_PLAFA 331 Plasmepsin 2 36D:38G:39S:77M:78N:79Y:80V:81S:113F:125I:133L:194Y:216D:218G:219T:220S:223T:292I:296F:302I 9 1mui A 1 B AB1 C 1 B 100 23289 23289 23289 Q903J0_9HIV1 99 protease 25D:27G:28A:29D:30D:47I:48G:49G:50I:81P:82V:84I 9 1mui B 1 A AB1 C 1 B 100 23289 23289 23289 Q903J0_9HIV1 99 protease 25D:27G:28A:29D:30D:32V:49G:50I:81P 9 2o4s A 1 A AB1 D 1 A 400 23289 23289 23289 POL_HV1BR 99 protease 25D:27G:28A:29D:32V:47I:48G:49G:50I:82V:84I 9 2o4s B 1 B AB1 D 1 A 400 23289 23289 23289 POL_HV1BR 99 protease 8R:25D:27G:28A:29D:30D:32V:47I:48G:49G:50I:81P:82V 9 2q5k A 1 A AB1 F 1 A 201 23289 23289 23289 O38732_9HIV1 99 Protease 25D:27G:28A:29D:32V:48G:49G:50I:81P:82V:84I 9 2q5k B 1 B AB1 F 1 A 201 23289 23289 23289 O38732_9HIV1 99 Protease 8R:25D:27G:28A:29D:30D:32V:47I:48G:49G:50I:81P:82V 9 2qhc A 1 A AB1 E 1 B 9001 23289 23289 23289 POL_HV1BR 99 PROTEASE RETROPEPSIN 8R:25D:27G:28A:29D:30D:32V:49G:50I:81P 9 2qhc B 1 B AB1 E 1 B 9001 23289 23289 23289 POL_HV1BR 99 PROTEASE RETROPEPSIN 25D:27G:28A:29D:30D:32V:48G:49G:50I:81P:82V:84I 9 2z54 A 1 A AB1 D 1 A 200 23289 23289 23289 POL_HV1B5 99 HIV-1 Protease 8R:25D:27G:28A:29D:30D:32V:49G:50I:81P:82V 9 2z54 B 1 B AB1 D 1 A 200 23289 23289 23289 POL_HV1B5 99 HIV-1 Protease 25D:27G:28A:29D:30D:32V:48G:49G:50I:81P:82V:84I 9 6dj1 A 1 A AB1 E 1 B 201 23289 23289 23289 Q5RZ08_9HIV1 99 HIV-1 protease 25D:27G:28A:29D:30D:32V:48G:49G:50I:84I 9 6dj1 B 1 B AB1 E 1 B 201 23289 23289 23289 Q5RZ08_9HIV1 99 HIV-1 protease 8R:25D:27G:28A:29D:30D:32V:47I:48G:49G:50I:81P:82V:84I 9 6dj2 A 1 A AB1 E 1 B 201 23289 23289 23289 Q5RZ08_9HIV1 99 HIV-1 protease 25D:27G:28A:29D:32V:47I:48G:49G:50I:81P:82V:84I 9 6dj2 B 1 B AB1 E 1 B 201 23289 23289 23289 Q5RZ08_9HIV1 99 HIV-1 protease 8R:25D:27G:28A:29D:30D:32V:47I:48G:49G:50I:81P:82V 9 6pjb A 1 B AB1 K 1 A 105 23289 23289 23289 Q8ULI9_9HIV1 99 Protease NL4-3 8R:25D:27G:28A:29D:30D:32V:48G:49G:50I:81P 9 6pjb B 1 A AB1 K 1 A 105 23289 23289 23289 Q8ULI9_9HIV1 99 Protease NL4-3 25D:27G:28A:29D:30D:32V:48G:49G:50I:81P:84I 9 2q55 A 1 A MU0 E 1 B 200 23289 23289 23289 O38732_9HIV1 99 Protease 25D:27G:28A:29D:32V:48G:49G:50I:81P:82V:84I 9 2q55 B 1 B MU0 E 1 B 200 23289 23289 23289 O38732_9HIV1 99 Protease 8R:25D:27G:28A:29D:30D:47I:48G:49G:50I:81P:82V 9 6pjc A 1 B OR1 G 1 A 101 23289 23289 23289 Q8ULI9_9HIV1 99 Protease NL4-3 8R:25D:27G:28A:29D:30D:32V:47I:48G:49G:50I:81P:82V:84I 9 6pjc B 1 A OR1 G 1 A 101 23289 23289 23289 Q8ULI9_9HIV1 99 Protease NL4-3 25D:27G:28A:29D:30D:32V:48G:49G:50I:81P:82V:84I 9 6pjc C 1 D OR1 J 1 C 101 23289 23289 23289 Q8ULI9_9HIV1 99 Protease NL4-3 25D:27G:28A:29D:30D:32V:47I:49G:50I:81P:82V:84I 9 6pjc D 1 C OR1 J 1 C 101 23289 23289 23289 Q8ULI9_9HIV1 99 Protease NL4-3 8R:25D:27G:28A:29D:30D:48G:49G:50I:81P 9 2q54 A 1 A MU1 G 1 B 200 23289 23289 23289 O38732_9HIV1 99 Protease 8R:23L:25D:27G:28A:29D:30D:32V:48G:49G:50I:81P:82V:84I 9 2q54 B 1 B MU1 G 1 B 200 23289 23289 23289 O38732_9HIV1 99 Protease 8R:25D:27G:28A:29D:48G:49G:50I:81P:84I 9 6pjm A 1 A OQV E 1 B 101 23289 23289 23289 Q8ULI9_9HIV1 99 Protease NL4-3 23L:25D:27G:28A:29D:30D:32V:47I:48G:49G:50I:81P:84I 9 6pjm B 1 B OQV E 1 B 101 23289 23289 23289 Q8ULI9_9HIV1 99 Protease NL4-3 8R:25D:27G:28A:29D:30D:48G:49G:50I:81P:84I 9 6pjo A 1 B OQ7 C 1 A 101 23289 23289 23289 Q8ULI9_9HIV1 99 Protease NL4-3 8R:25D:27G:28A:29D:30D:32V:48G:49G:50I:81P:84I 9 6pjo B 1 A OQ7 C 1 A 101 23289 23289 23289 Q8ULI9_9HIV1 99 Protease NL4-3 8R:23L:25D:27G:28A:29D:30D:32V:48G:49G:50I:81P:84I